TCONS_00025470-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00025470-protein
Unique NameTCONS_00025470-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1006

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00025470-protein ID=TCONS_00025470-protein|Name=TCONS_00025470-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1006bp
CCFRLQCKKTNEREQTCFKKTQGKIFCRASKMGRVTVFSILVLVVCVYTG
YDAASIQERDISNTLERLDKSLKSLTNELKDEVNHVKYDRGDEFLGHKAV
NTKRQTSANSIFCDFSRFSSNCDIKFVAEDHNENKPKWELRHDYSFIRDS
SSPIGGSFWYADITDNHPKNEFTTLSAPFEVQGSSNDQCIEFSYLMYHHN
RYCDTARFKVELVCGDKTTELFRASTTPSYKWYKAAVSAKAQAGSDCEVL
FHVARGLGQSRGSLGVDDFKVTFGSKCSDSSIAADAKDNVPEDMKCDFEH
YQDECLWKMRGNLPWAHANWGTPQGSTGPSAYFGHHLYRVSGGGYRYIDA
RKDDKMDKRGKNAYYISPELTGNGDKRMKMAYSMYGVDMGSLSIAVIENG
KENELFKIEGDQGKGKIKDLKHWFDACVDLPSSGKFQIKIEGIVGLAKDL
QFNQDVKSDIAIDAVDIEAGKCNQQQPLASCSHGKGESCPYVTEDSCGAE
ETEEFRLDDEFEARRGKFLTTIPRISKEFTISLKVKVEKKTSDWRNIIKF
TESGRDCCWRGDRVPTLLILPNQLNVEVATQIGWNGNWHNKGINLQENKW
HTIKMEQKKEADGKYYFYIHFDGQQMAKQHQDIPREKHNVKVWASDIFHE
AGGVIIKDLLFQNKKGSFDECKAVCNKPLSDQDFDVFFDRTQKQETVIYE
NAAVMTPTKNSLVKDNFEVGQEYELSMEIKAKEKKGGWTNIVHVTNGANC
CDKGMRVPAVFIYSNDYRMHITAPVNHNGNHAYNDGRLKQDEWVKLVIQQ
KRDAFGHLLYSILIDDKEEHRYINSDPQSYQNMKMYLSDNWHNAPGVEIR
NVVFKSFGGSAGTYPCPEMCKAIPQEEDINGTTVKTLTYTYETCKDREYQ
LSVQPTRLFTRYGCLHISYKMAAKSIQGTSHCDFHVQANRHNIKQIKLRG
DGEVGKWYEEKFSIHNYWRRFGRPIIGIRGAYTRNHCVAMTFGEIRLDEG
VCPGEQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014296XLOC_014296Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00025470TCONS_00025470Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000998MAM_dom
IPR013320ConA-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
NoneNo IPR availableGENE3D2.60.120.200coord: 515..662
e-value: 5.1E-5
score: 22.9
NoneNo IPR availableGENE3D2.60.120.200coord: 107..277
e-value: 2.0E-11
score: 43.7
coord: 291..472
e-value: 4.5E-23
score: 81.6
NoneNo IPR availableGENE3D2.60.120.560coord: 680..858
e-value: 9.2E-4
score: 18.6
IPR000998MAM domainSMARTSM00137MAM_2coord: 291..474
e-value: 7.4E-5
score: 6.3
IPR000998MAM domainPFAMPF00629MAMcoord: 296..473
e-value: 7.0E-14
score: 51.9
coord: 113..277
e-value: 1.3E-8
score: 34.8
IPR000998MAM domainPROSITEPS50060MAM_2coord: 294..474
score: 16.546
IPR000998MAM domainPROSITEPS50060MAM_2coord: 111..279
score: 16.139
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 110..274
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 293..472

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025470-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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