TCONS_00024930-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024930-protein
Unique NameTCONS_00024930-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length810

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024930-protein ID=TCONS_00024930-protein|Name=TCONS_00024930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=810bp
KLVCFIKDLHNLQHHPEPVLYLLQQLIKHNSAYNPYRKQTQSLGEITFVL
TTTQENDYLRDMVNFIPVIKFPEVCVDDQERIFNTILSFHFMSSQDRSFM
DLMAVKTPNVEDYAHMKRMENVTAMKKLLNKIVSITIELQNVMKTMYLRT
PQRFHYVFTMRTLKRLFTQLCRSLPSDAAPRDILTTWYYELHWTYHYVLI
DDVDKERWRHTFKTIAKKELAKEQMEILEDEVPILSNIVVDKETQTVVHW
ENQESPMNNKFSIQQLQTYLKNHLMEFNKDNPKLKIYFFEDRVRIMYRLL
QILQSNFSNGHALLIMEGSPDIPPMLFRLLSDILQIELFTVNPSSVANDR
VYDMEMFKSDLVSCLIKAGIKKQKVIFTLTSLELFDDGIITLVDELLQKG
TMAHVFNEEDKNSVINTIRTSGDQEQARLSKAEAWNEFVKNIHENLHVLL
SLSFTDEKFQEISLRHPNLITAMQVVYSKIWDQQKLVQVAQYVLSELTDL
KESKKQDIAYLLAALHIELQKQDGGEVAGRYNNITNANFELFIERFVDFY
TAKTKEIGEQKETIRNTLRTVEESSSTGLSLVKKLDHEKRVITQKQQGCT
TLLTQIGQDRAITEEHTRLVKKTKSKRDKLKKLIPQYEEAHKRAIFKAAA
IVRETKSILQSLDDRELSDIRSMQKPDSEIEDLLAAIIIVVKSPSADLTW
NRGAKRIMANIERFKEDLSGFDDVELPDATLQVLRPYVNKPHFAPGYLST
RTGNTAIGSLVLYVRGVVRYNYIMQSHVKPLHQKVSDTAEKLDMVSEKLS
GMEKKLKVCE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014013XLOC_014013Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024930TCONS_00024930Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024743Dynein_HC_stalk
IPR024317Dynein_heavy_chain_D4_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 620..640
NoneNo IPR availablePFAMPF12775AAA_7coord: 114..175
e-value: 1.6E-5
score: 24.3
IPR024743Dynein heavy chain, coiled coil stalkPFAMPF12777MTcoord: 564..806
e-value: 1.5E-15
score: 57.0
IPR024317Dynein heavy chain, P-loop containing D4 domainPFAMPF12780AAA_8coord: 278..543
e-value: 1.7E-23
score: 83.1

Blast
[Close]
BLAST of TCONS_00024930-protein vs. Swiss-Prot (Human)
Match: DYH9 (Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 8.843e-45
Identity = 153/703 (21.76%), Postives = 321/703 (45.66%), Query Frame = 0 
Query:  115 HMKRMENVTAMKKLLNKIVSITIELQNVMKTMYLRTPQRFHYVFTMRTLKRLFTQ-LCRSLPSDAAPRDILTTWYYELHWTYHYVLIDDVDKERWRHTFKTIAKKELAKEQMEILEDEVPIL----SNIVVDKETQTVVHWENQESPMNNKFSIQQLQTYLKNHLMEFNKDNPKLKIYFFEDRVRIMYRLLQILQSNFSNGHALLIMEGSPDIPPMLFRLLSDILQIELFTVNPSSVANDRVYDMEMFKSDLVSCLIKAGIKKQKVIFTLTSLELFDDGIITLVDELLQKGTMAHVFNEEDKNSVINTIRTSGDQEQARLSKAEAWNEFVKNIHENLHVLLSLSFTDEKFQEISLRHPNLITAMQVVYSKIWDQQKLVQVAQYVLSELTDLKESKKQDIAYLLAALHIELQKQDGGEVAG--RYNNITNANFELFIERFVDFYTAKTKEIGEQKETIRNTLRTVEESSSTGLSLVKKLDHEKRVITQKQQGCTTLLTQIGQDRAITEEHTRLVKKTKSKRDKLKKLIPQYEEAHKRAIFKAAAIVRETKSILQSLDDRELSDIRSMQKPDSEIEDLLAAIIIVVKSPSA----DLTWNRGAKRIMANIERFKEDLSGFDDVELPDATLQVLRPYVNKPHFAPGYLSTRTGNTAIGSLVLYVRGVVRYNYIMQSHVKPLHQKVSDTAEKLDMVSEKLSGMEKKL 806
            H+K      +++K +  ++ + +     + T +L T  +FHY+F +R    +F   L  S+    +  D++  + +E +  Y   ++++ D + +      + KK     +  + + + P L    +N + + +   V  WE            Q L   L+NH    N+ N  + +  FED +R +  + +IL+S    G+ALL+  G       L RL + I  +++F +        + Y ++ FK DL S  +KAG+K    +F +T  ++ D+  + L+++LL  G +  ++++++  ++I+ +R     +    ++   W  F+  I   L V L  S    K +  S + P ++    + +   W QQ L  V+   L     ++ + KQ I+  +A +H  + +     ++   RYN  T  +F  FI  +        KE+  + E + N L  +  +S+    L  KL  ++  + QK +    L+  +G +         +  + + K   +   + Q ++  +  + KA   +   ++ L +L+   L++++S   P   + ++ AA+++++ +P      D +W + AK  MA ++ F + L  F+   + +  L+ +RPY+  P F P +++T++   A   L  +V  +VR+ Y +   V+P  Q ++     L    EKL+ ++ K+
Sbjct: 2634 HLKLGNFPASLQKSIPPLIDLALAFHQKIATTFLPTGIKFHYIFNLRDFANIFQGILFSSVECVKSTWDLIRLYLHESNRVYRDKMVEEKDFDLFDKIQTEVLKKTFDDIEDPVEQTQSPNLYCHFANGIGEPKYMPVQSWE---------LLTQTLVEALENH----NEVNTVMDLVLFEDAMRHVCHINRILES--PRGNALLVGVGGSG-KQSLTRLAAFISSMDVFQITLR-----KGYQIQDFKMDLASLCLKAGVKNLNTVFLMTDAQVADERFLVLINDLLASGEIPDLYSDDEVENIISNVRNEVKSQGLVDNRENCWKFFIDRIRRQLKVTLCFSPVGNKLRVRSRKFPAIVNCTAIHWFHEWPQQALESVSLRFLQNTEGIEPTVKQSISKFMAFVHTSVNQTSQSYLSNEQRYNYTTPKSFLEFIRLYQSLLHRHRKELKCKTERLENGLLKLHSTSAQVDDLKAKLAAQEVELKQKNEDADKLIQVVGVETDKVSREKAMADEEEQKVAVIMLEVKQKQKDCEEDLAKAEPALTAAQAALNTLNKTNLTELKSFGSPPLAVSNVSAAVMVLM-APRGRVPKDRSW-KAAKVTMAKVDGFLDSLINFNKENIHENCLKAIRPYLQDPEFNPEFVATKS--YAAAGLCSWVINIVRF-YEVFCDVEPKRQALNKATADLTAAQEKLAAIKAKI 3310
The following BLAST results are available for this feature:
BLAST of TCONS_00024930-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYH98.843e-4521.76Dynein heavy chain 9, axonemal OS=Homo sapiens GN=... [more]
back to top