TCONS_00024726-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024726-protein
Unique NameTCONS_00024726-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length944

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024726-protein ID=TCONS_00024726-protein|Name=TCONS_00024726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=944bp
MEQNPYHNSLSINIDVDQPTAFLDTRLLQQPPQDSSFQQDMGIARFTQKR
HSPSLDNLFSNRDVLARRLKNRPDRDDLVDRNIIPAHAHAATPAIFNKVA
QLERKKTGDFLTKKIRARPSRQQLIQRHILSADSRVDPSLLEKVGKLERQ
RIADQLNERLLQRPGPIELIQDRILPVESPIQNAIDQGSVDYQQTVSPAS
SHADSPSVSELETGIHTLNCTSPSPPPPPHSTPQVPPLPNNFSDVSFKNQ
LKTVSESGKTSNPLFVSDSFKSAHSISLSQRENERLVKSVNKKTRQQKPK
VKKLKFHECLPGSGTVKKVEAESEVVDERYQRLLEQQTLYLRLQVMQQNA
VMNALQGNPESMDQVNEEIEHMMQKENNKTNDTNIKSIDGKKLDDLRVVD
LRAQLKHRGLLVSGAKAKLIERLLAFEEGKSTPADFAYSGSNLSHDASIV
ASKTTSTMVPSTTVMQVATYATNSGQTYQVVQTVPQSSPSIMQYQVVPAT
SSSDEQLSRLDQVNTVPVMALTQPSVMSVQERVSDKPLRAQATPSPSHIQ
FHITPPPQPQTPTIVLHSGPPLQQASLYQRQRQQKVKVQKLPVISQGQCF
DLSESNSQPLGLSQSVPPMQLNNNYLMEANQCNLNYNTSLSNSSLHTDVN
ADNDLFNNPSTQFRGRASSEPASQLKKMHPLKSDSTKSVFSHQQQDLSLQ
FPKMSPSPSLSLKDHHQLPNSIKSENMDDIMDIIGELSSSPGLMKEPPPP
YNSCYYDNKKLLTEQKPFNTSDAHDLNLLSGSPSQNFLNNSFYNTAGFNT
SSSTGSIPQQTSPTPFRGTSPSHFMNTAALSPTNATTDDPMELDRFPSPN
MMASNNSLNWLDLNMEPNSPNMNFQTIKDNNTANTTNSMNMDLQNGMFSN
ELNNQQQTLYNNQNRQSQNSLFYGSSPRQQDGFISLFDLEGGEY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013888XLOC_013888Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024726TCONS_00024726Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004018RPEL_repeat
IPR003034SAP_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 316..336
NoneNo IPR availableCOILSCoilCoilcoord: 362..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..695
IPR004018RPEL repeatSMARTSM00707rpelcoord: 109..134
e-value: 0.0037
score: 26.5
coord: 154..179
e-value: 0.018
score: 24.2
coord: 63..88
e-value: 6.5E-4
score: 29.0
IPR004018RPEL repeatPFAMPF02755RPELcoord: 111..130
e-value: 9.3E-6
score: 25.1
coord: 65..86
e-value: 2.0E-7
score: 30.4
IPR004018RPEL repeatPROSITEPS51073RPELcoord: 63..88
score: 10.313
IPR004018RPEL repeatPROSITEPS51073RPELcoord: 109..134
score: 10.38
IPR004018RPEL repeatPROSITEPS51073RPELcoord: 154..179
score: 8.497
IPR003034SAP domainSMARTSM00513sap_9coord: 393..427
e-value: 6.1E-6
score: 35.7
IPR003034SAP domainGENE3D1.10.720.30coord: 362..439
e-value: 6.5E-13
score: 48.0
IPR003034SAP domainPFAMPF02037SAPcoord: 394..426
e-value: 1.5E-7
score: 30.9
IPR003034SAP domainPROSITEPS50800SAPcoord: 393..427
score: 10.585
IPR003034SAP domainSUPERFAMILY68906SAP domaincoord: 392..428

Blast
[Close]
BLAST of TCONS_00024726-protein vs. Swiss-Prot (Human)
Match: MKL2 (MKL/myocardin-like protein 2 OS=Homo sapiens GN=MKL2 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 8.685e-33
Identity = 154/455 (33.85%), Postives = 230/455 (50.55%), Query Frame = 0 
Query:   57 NLFSNRDVLARRLKNRPDRDDLVDRNIIPAHAHAATPAIFNK-VAQLERKKTGDFLTKKIRARPSRQQLIQRHILSADSRVDPSLLEKVGKLERQRIADQLNERLLQRPGPIELIQDRILPVESPIQNA-IDQGSVDYQQT-----VSPASSHADSPS--VSELETGIHTLNCTSPSPPPPPHS-TPQVPPLPNNFSDVSFKNQLKTVSESGKT-----------SNPLFVSDSFKSAHS----ISLSQRENERLVKSVNKKTRQQKPKVKKLKFHECLPGSGTVKKVEAESEVVDERYQRLLEQQTLYLRLQVMQQNAVMNALQGN-PESMDQVNEEIEHMMQKE-NNKTNDTNIKSIDG---------KKLDDLRVVDLRAQLKHRGLLVSGAKAKLIERLLAFEEGKSTPADFAYSGSNLSHDASIVASKTTSTM-VPSTTVMQVATYATNS 474
            N  S ++VL  RL+ R  R+ LVD+ I+P      +PA F++ +  LER +T +FL  KIR+RP R +L++ HIL  ++  +PSL     KL+R R+AD LNE++ QRPGP+EL++  ILPV+S ++ A I  G  DY  T         SS A SP    S+   G    +  SPS P    S +P     P  F+ VS      TV E  KT           + P+  +++  SA      +  S  +N    K  +KK +  KP+VKKLK+H+ +P     +K E +   +D  Y RLL+QQ L+L+LQ++ Q       Q   P     +N++  +      NN T +T  ++              LDDL+V +L+ +LK RGL VSG K  LIERL  ++E  S+    A  G      ++IV S    T+ +P TT+    T + ++
Sbjct:   34 NQKSLKEVLQLRLQQRRTREQLVDQGIMPP---LKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHILE-ETFAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSVKEAIIGVGKEDYPHTQGDFSFDEDSSDALSPDQPASQESQG----SAASPSEPKVSESPSPVTTNTPAQFASVS-----PTVPEFLKTPPTADQPPPRPAAPVLPTNTVSSAKPGPALVKQSHPKNPN-DKHRSKKCKDPKPRVKKLKYHQYIPPDQKGEKNEPQ---MDSNYARLLQQQQLFLQLQILSQQKQHYNYQTILPAPFKPLNDKNSNSGNSALNNATPNTPRQNTSTPVRKPGPLPSSLDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQEVNSS--GLAAGGIVAVSSSAIVTSNPEVTVALPVTTLHNTVTSSVST 469
The following BLAST results are available for this feature:
BLAST of TCONS_00024726-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MKL28.685e-3333.85MKL/myocardin-like protein 2 OS=Homo sapiens GN=MK... [more]
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