TCONS_00024645-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00024645-protein
Unique Name	TCONS_00024645-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	457

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00024645-protein ID=TCONS_00024645-protein|Name=TCONS_00024645-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
LKKIMCLQLPMKSTLLLIRTLGILWYTSKISVIKIIMMNTQAEVTVKTKN
SMLARSPVVTDPTKMSPINIVPNWTILRNPVGVFSHRKLTNFNNSLNAFG
FSTVKNEKMHSLTDSISPASKYLPKNTKVTSGKLHRGHSKIAASASIPSK
YQTIVISNEERKGFSSGTKRFSDLSLTEGPGPGNYSIAKSLSHESHVSHS
KKGLGGFASKVSRFPQPWNEEHTVGPGQYESNGFASQKDFNKANCTSNFH
KPIAVKNEKMQYQTPAPNQYNISQKQTGKTTRENNVAACAAFSSKTKRDF
LSRLPQRVVPAPGQYNIPDPWTNESDNLRGTQAPFKSTTDRFAVMNKAAL
ENPGPGSYNPYEKLKILNRKSLPRKYYLCISAPAISMPPEPDAPGPGQYD
LVDYDGEQPQFATSSMFVSTTNRMVPKRNGNAPGPGTYNPHHIGKVSFLY
NSDKKWI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_013837	XLOC_013837	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00024645	TCONS_00024645	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010736	SHIPPO-rpt

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010736	Sperm-tail PG-rich repeat	PFAM	PF07004	SHIPPO-rpt	coord: 394..403 e-value: 2.1 score: 9.3 coord: 179..196 e-value: 0.75 score: 10.7 coord: 352..371 e-value: 0.59 score: 11.1 coord: 433..442 e-value: 0.35 score: 11.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..330

Blast

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BLAST of TCONS_00024645-protein vs. Swiss-Prot (Human)
Match: STPG1 (O(6)-methylguanine-induced apoptosis 2 OS=Homo sapiens GN=STPG1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.813e-39
Identity = 121/320 (37.81%), Postives = 165/320 (51.56%), Query Frame = 0

Query:  145 ASIPSKYQTIVISNEERKGFSSGTKRFSDLSLTEGPGPGNYSIAKSLSHESHVSHSKKGLGGFASKVSRFPQ-----PWNEEHTVGPGQYESNGFASQKDFNKANCTSNFHKPIAVKNEKMQYQTPAPNQYNISQKQTGKTTRENNVAACAAFSSKTKRDFLSRLPQRVVPAPGQYNIPDPWTNESDNLRGTQAPFKSTTDRFAVMNKAALENPGPGSYNPYEKLKILNRKSLPRKYYLCISAPAISMPPEPDAPGPGQYDLVDYDGEQPQFATSSMFVSTTNR--MVPKRNGNAPGPGTYNPHHIGKVSFLYNSDKKWI 457
            +SIP K Q  VI   E+KGF+S  KRF      + PGPG Y++       + VS SKKG   F S  +R        P    +T+       + F S++DF+ + C+S F  P  +K   ++++TPAPN YN S        + NNV   A F SKT+R   +   +   P PG Y+I +    +S N     + FKS T+R   +       PGPG YNP +  K+  +   P+   L  SA    +PP+P  PGPGQY++VDY G +  F +S+ FVS T+R    P + G  PGP TY P   GK SFLYN DKKWI
Sbjct:   33 SSIPFKSQASVIPESEKKGFNSQAKRFPHKK-NDIPGPGFYNVIHQSPVSNSVSLSKKGTCMFPSMCARLDTIISKYPAANAYTI------PSDFISKRDFSNS-CSSMFQLPSFMK--ALKFETPAPNYYNAS---VSCCKQRNNVCTRAGFMSKTQRGSFAFADKG--PPPGHYDINESLVKQSPNT--LMSCFKSKTNRGLKLTSTG---PGPGYYNPSDCTKVPKKTLFPKNPILNFSAQPSPLPPKPPFPGPGQYEIVDYLGPRKHFISSASFVSNTSRWTAAPPQPG-LPGPATYKPELPGKQSFLYNEDKKWI 331

The following BLAST results are available for this feature:

BLAST of TCONS_00024645-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00024645-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
STPG1	7.813e-39	37.81	O(6)-methylguanine-induced apoptosis 2 OS=Homo sap...	[more]

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TCONS_00024645-protein (polypeptide) - C. hemisphaerica