TCONS_00024372-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00024372-protein
Unique Name	TCONS_00024372-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	469

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00024372-protein ID=TCONS_00024372-protein|Name=TCONS_00024372-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
MNFNKGQIWYFSILIIRTCITLLSQLPLSLSDDIKDWTLVYSKELTCLQA
NERLLALKAQQTDSTRFNALLLDCSRINQPAEQKNEEKFTDSKSDHNRLR
KDDRRLENVIFYELRTKSGTLVPNRGGMKNIKDELLSNTESIVMQLKRNS
EFLSPSFLTERRLGDLYTEGHFDENMNQCFYTGVVLGDNKSSVTLNICEG
MQGVIRTSQSELLISPTPEYTSTNPEHHLYAAKFDTNKTPSGHDGSNKKK
ESPCPLSGNRAIPKLPNEYKFSYDTDGNLRLSLDHHGRSRARRSLSVKRH
IETLLVADETMFEYYGRKEETLQRYLLSIMAIVTTLMKDQSIGNYVDVSV
IKLIILKKNPHGLNVTKNASKSLKSFCEWQQLQNKGNDGHPEHFDTAILV
TRNNLCSGDDKCETLGLAELGSICDPVRSCSVVEDNGLSVAFTIAHEVGH
LLNAPHDGESNTCNELNDQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_013674	XLOC_013674	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00024372	TCONS_00024372	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024079	MetalloPept_cat_dom
IPR001590	Peptidase_M12B
IPR002870	Peptidase_M12B_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0008237	metallopeptidase activity
GO:0004222	metalloendopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 456..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..261
None	No IPR available	CDD	cd04273	ZnMc_ADAMTS_like	coord: 299..465 e-value: 8.45003E-84 score: 258.322
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 296..464
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 294..469 e-value: 4.7E-58 score: 196.0
IPR001590	Peptidase M12B, ADAM/reprolysin	PFAM	PF01421	Reprolysin	coord: 299..463 e-value: 1.1E-13 score: 51.5
IPR001590	Peptidase M12B, ADAM/reprolysin	PROSITE	PS50215	ADAM_MEPRO	coord: 299..469 score: 17.652
IPR002870	Peptidase M12B, propeptide	PFAM	PF01562	Pep_M12B_propep	coord: 107..230 e-value: 3.6E-18 score: 66.0

Blast

[Close]

BLAST of TCONS_00024372-protein vs. Swiss-Prot (Human)
Match: ATS15 (A disintegrin and metalloproteinase with thrombospondin motifs 15 OS=Homo sapiens GN=ADAMTS15 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.531e-60
Identity = 118/344 (34.30%), Postives = 192/344 (55.81%), Query Frame = 0

Query:  123 PNRGGMKNIKDELLSNTESIVMQLKRNSEFLSPSFLTERRLGDLYTEGHFDENMNQCFYTGVVLGDNKSSVTLNICEGMQGVIRTSQSELLISPTPEYTSTNPEHHLYAAKFDTNKTPSGHDGSNKKKESPCPLSGNRAIPKLPNEYKFSYDTDGNLRLSLDHHGRSRARRSLSVKRHIETLLVADETMFEYYGRKEETLQRYLLSIMAIVTTLMKDQSIGNYVDVSVIKLIILKKNPHGLNVTKNASKSLKSFCEWQQLQNKGNDGHPEHFDTAILVTRNNLCSGDDKCETLGLAELGSICDPVRSCSVVEDNGLSVAFTIAHEVGHLLNAPHDGESNTCNEL 466
            P   G + +  ++ +  E   + L  +++FL+P+F TE     L        ++ +CFY+G V  +  S   +++C G++G      +E +ISP P  ++   + +   A     +   G    +           N AI +  + YK      G  R         RA+R +S+ R++ETL+VADE+M +++G     L+ YLL+++A    L +  SI N +++ V+K+++L+    G  VT NA+ +L++FC WQ+  NK +D HPE++DTAIL TR +LC G   C+TLG+A++G++CDP RSCSV+ED+GL  AFT AHE+GH+ N PHD     C E+
Sbjct:   45 PEDSGDQGLIFQITAFQEDFYLHLTPDAQFLAPAFSTEHLGVPLQGLTGGSSDLRRCFYSGDVNAEPDSFAAVSLCGGLRGAFGYRGAEYVISPLPNASAPAAQRNSQGAHLLQRRGVPGGPSGDPTSRCGVASGWNPAILRALDPYKPRRAGFGESRSRRRS---GRAKRFVSIPRYVETLVVADESMVKFHG---ADLEHYLLTLLATAARLYRHPSILNPINIVVVKVLLLRDRDSGPKVTGNAALTLRNFCAWQKKLNKVSDKHPEYWDTAILFTRQDLC-GATTCDTLGMADVGTMCDPKRSCSVIEDDGLPSAFTTAHELGHVFNMPHD-NVKVCEEV 380

The following BLAST results are available for this feature:

BLAST of TCONS_00024372-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00024372-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATS15	9.531e-60	34.30	A disintegrin and metalloproteinase with thrombosp...	[more]

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TCONS_00024372-protein (polypeptide) - C. hemisphaerica