TCONS_00023879-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023879-protein
Unique NameTCONS_00023879-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length213

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023879-protein ID=TCONS_00023879-protein|Name=TCONS_00023879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
KEMDFNDSILFYTSFPSAVKEPEKWHKWVRAMRREGWEPTPHSRICSDHF
KEEFIRRPENLNDKVMLKFNAVPTRFKAFPDHLKKQEIPKERNRPKIREP
LKPINTPGKNIQTTKSEEDPLEKMRRELEKKSSEIKELKKKLNTQQQKRR
CQKKIKSMKDVVADLRKQNLASDQCIQSLEKNFKGVPLEIMKRMKAIENK
QHAEWTYLMMKVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013423XLOC_013423Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023879TCONS_00023879Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..168
NoneNo IPR availableGENE3D1.20.5.340coord: 109..203
e-value: 0.0011
score: 18.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..121
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 11..78
IPR006612Zinc finger, C2CH-typeSMARTSM00980THAP_2coord: 8..82
e-value: 1.2E-5
score: 34.7
IPR006612Zinc finger, C2CH-typeSMARTSM00692dm3coord: 12..81
e-value: 0.0057
score: 23.8
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 12..76
e-value: 1.1E-10
score: 42.2
IPR006612Zinc finger, C2CH-typePROSITEPS50950ZF_THAPcoord: 1..76
score: 14.861

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023879-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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