TCONS_00023849-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023849-protein
Unique NameTCONS_00023849-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1106

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023849-protein ID=TCONS_00023849-protein|Name=TCONS_00023849-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1106bp
MEEEISESSEALLVKKKTKEAKKVKAARQRTQARFETLLNVGSGSEEVSE
TAQPIRKSKKERVRSKTADSVAISKPSNSKKKQSRSLEDLVQDEDEQMKS
SNLKEKARKKKKKAADDSTRKKRTKSEKSKSEEDGEENYAFEQSFNSVVD
DHEKAPQSQQEDEDDDQELQTKSKTKKAKEKKRKRKASASERIMNAMEKK
YQDDVLLLCLIVHRCDQLKPDIRIHHPVVRIHIVDMETGQYVKKRDKSRN
VTSLLENENENIDYVLPMMTQPFDFKKRRTLTPAWEETIIYNERYSYFLQ
REQDSPPVVIFFELLDFMQMNLNSKEYSKTDKGWHRIAWAFLKLVSPTTG
VTNTDKRLRLQLYQPVTKTRVKPSENSGIEIYQWWMYGSRVKYDSTFYVT
VKGVQSPKGLKPTTRSTFPTQLERAGMTFEELNSTLETNAAQSDHETTSH
IWTKLPGQVNRIPNHAELTIPTGRKGCSVVSFSQDGRYIALGCSTNEGFP
VTVYEFPENKLICTFGNHFGIVYALTWSSNGKELLSASADTTVRCWDTKR
FLSSAIKVFPHPSYVYACKYHPIQQNLVVTGSYDRTIRVWNKISDGLHAE
LLKEFTEHTGYVNALVFSLDGTMMFTGDSNGVINMWQTKAEKKKKDVSEQ
VNRWKLMRTVELEELKRVSINSLTLHPNQLKLLVHARDSILRMLDLRSDG
ILKTYVGGMNFKEYIRSTLSPCGSYVFCGAENGLVNVWNTETGQQVYTYK
SLGYTQAVSDICFHPHDNFIAFCCYGNAYPVQVYSYKPSAKYATDEEPER
TTTPIPKKVQESQRDLEETTELYKSLRTATIITDDTKRMERVNERLKSVT
SPSTFLDDTTDLIGTKGRVTFKDPSPRSDYSLSPRQQDYQTMRSTWGSDF
STTKYDSTSKDQYGYSLDSNIVESSTRPVDRTMTMSQLDASRKADVKELV
KAIYEYQPARSDELYIRPGDVITIMEKNDSDWWMGYIEADDRQGYFPSNY
VEPYNRQRNGMXEADDRQGYFPSNYVEPYNHQRNDKTDTDDRSTSTKSSK
EKRKTHSAVIDKHGQFRVVSGTEEENSDVDIQSSKKSRRRQRREMANSML
SSSVNT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013402XLOC_013402Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023849TCONS_00023849Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR013315Spectrin_alpha_SH3
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 809..829
NoneNo IPR availableCOILSCoilCoilcoord: 14..34
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availableGENE3D2.30.30.40coord: 996..1009
e-value: 0.02
score: 14.1
NoneNo IPR availableGENE3D2.30.30.40coord: 1010..1023
e-value: 0.0011
score: 18.2
NoneNo IPR availableGENE3D2.30.30.40coord: 1024..1061
e-value: 8.3E-4
score: 18.4
NoneNo IPR availableGENE3D1.10.10.670coord: 587..656
e-value: 7.9E-16
score: 57.3
NoneNo IPR availableGENE3D2.30.30.40coord: 937..995
e-value: 1.2E-22
score: 78.9
NoneNo IPR availableCDDcd00200WD40coord: 469..771
e-value: 7.65688E-46
score: 166.741
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 992..1004
score: 50.4
coord: 948..958
score: 31.02
coord: 979..988
score: 32.41
coord: 962..977
score: 32.71
IPR001452SH3 domainSMARTSM00326SH3_2coord: 948..1005
e-value: 9.1E-22
score: 88.3
IPR001452SH3 domainPFAMPF00018SH3_1coord: 951..998
e-value: 1.3E-13
score: 50.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 945..1006
score: 19.099
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 947..1006
IPR013315Spectrin alpha chain, SH3 domainPRINTSPR01887SPECTRNALPHAcoord: 947..966
score: 37.4
coord: 967..981
score: 30.13
coord: 984..1005
score: 35.82
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 508..547
e-value: 8.5E-8
score: 41.9
coord: 552..591
e-value: 2.3E-6
score: 37.2
coord: 598..637
e-value: 1.0E-5
score: 35.0
coord: 463..505
e-value: 100.0
score: 4.3
coord: 742..785
e-value: 0.34
score: 20.0
coord: 698..739
e-value: 23.0
score: 8.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 511..547
e-value: 1.9E-4
score: 22.1
coord: 561..591
e-value: 0.0022
score: 18.7
coord: 600..636
e-value: 0.038
score: 14.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 558..591
score: 10.843
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 605..646
score: 11.578
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 515..547
score: 12.514
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 657..936
e-value: 2.4E-17
score: 62.5
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 74..586
e-value: 3.0E-34
score: 117.5
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 515..748
score: 26.577
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 470..787

Blast
[Close]
BLAST of TCONS_00023849-protein vs. Swiss-Prot (Human)
Match: AHI1 (Jouberin OS=Homo sapiens GN=AHI1 PE=1 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 2.774e-175
Identity = 289/809 (35.72%), Postives = 452/809 (55.87%), Query Frame = 0 
Query:  203 DDVLLLCLIVHRCDQLKPDIRIHHPVVRIHIVDMETGQYVKKRDKSRNVTSLLENENENIDYVLPMMTQPFDFKKRRTLTPAWEETIIYNERYSYFLQREQDSPPVVIFFELLDFMQMN--LNSKEYSKTDKGWHRIAWAFLKLVSPTTGVTNTDKRLRLQLYQPVTKTRVKPSENSGIEIYQWWMYGSRVKYDSTFYVTVKGVQSPKGLKPTTRSTFPTQLERAGMTFEELNSTLETNAAQSDHETTSHI--WTKLPGQVNRIPNHAELTIPTGRKGCSVVSFSQDGRYIALGCSTNEGFPVTVYEFPENKLICTFGNHFGIVYALTWSSNGKELLSASADTTVRCWDTKRFLSSAIKVFPHPSYVYACKYHPIQQNLVVTGSYDRTIRVWNKISDGLHAELLKEFTEHTGYVNALVFSLDGTMMFTGDSNGVINMWQTKAEKKKKDVSEQVNRWKLMRTVELEELKRVSINSLTLHPNQLKLLVHARDSILRMLDLRSDGILKTYVGGMNFKEYIRSTLSPCGSYVFCGAENGLVNVWNTETGQQVYTYKSLGYTQAVSDICFHPHDNFIAFCCYGNAYPVQVYSYKPSAKYATDEEPER--TTTPIPKKVQESQRDLEETTEL--YKSLRTATIITDDTK--RMERVNERLKSVTSPSTFLDDTTDLIGTKGRVTFKDPSPRSDYSLSPRQQDYQTMRSTWGSDFSTTKYDSTSKDQYGYSLDSNIVESSTRPVDRTMTMSQLDASRKADVKELVKAIYEYQPARSDELYIRPGDVITIMEKNDSDWWMGYIEADDRQGYFPSNYV 1001
            DD L+L + +HR D+LK D  I HP+V+IH+VD  TGQYVKK D  R V+S  E EN  +DY+LP+MTQP+DFK+ ++  P WEE I++NE + Y L+   +SP V++FFE+LDF+ ++   N+ E    + G+ +IAWAFLKL+    G  N + +LRLQLY P TK R   S  S +E ++WW    R  Y ST YVTV+G++ P  +KP+ RS    Q E+      E +    +   +   E +  +  W +LPGQ  RIPN    ++  G +GC  + FS +GR +A  C++ +G+P+ +YE P  + +     H  I+Y L+WS +   +L++S+D T R W  +   ++  +V PHPS+VY  K+HP  + LVVTG YD  IR+W        A L+++F  H  ++N+L F  +G  M++GD  GVI +W T    K  D+   V+ W + + ++  E K + I+ L +HPN  +LL+H +DS LR++DLR   + + +VG  N++E I STL+PCG+++F G+E+G+V VWN ETG+QV  Y  L +   + DI +HP +N +AFC +G   P+ +Y Y         E  +R   T P+P  + +SQ  L    +L    S +    +  ++   +M+ V +RL++VT          ++I +      K+ S  S  ++S +Q   +        +            Q+G++  + I+    +P +            + D    V A+Y+Y   RSDEL I  GD+I +  K++ DWW G I    ++GYFP+N+V
Sbjct:  340 DDDLVLGVYIHRTDRLKSDFMISHPMVKIHVVDEHTGQYVKKDDSGRPVSSYYEKEN--VDYILPIMTQPYDFKQLKSRLPEWEEQIVFNENFPYLLRGSDESPKVILFFEILDFLSVDEIKNNSEVQNQECGFRKIAWAFLKLLG-ANGNANINSKLRLQLYYPPTKPR---SPLSVVEAFEWWSKCPRNHYPSTLYVTVRGLKVPDCIKPSYRSMMALQEEKGKPVHCERHHESSSVDTEPGLEESKEVIKWKRLPGQACRIPNKHLFSLNAGERGCFCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDSMIRIWKVEMREDSAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVWNTYV--KINDLEHSVHHWTINKEIKETEFKGIPISYLEIHPNGKRLLIHTKDSTLRIMDLRI-LVARKFVGAANYREKIHSTLTPCGTFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDISYHPFENMVAFCAFGQNEPILLYIYDFHVAQQEAEMFKRYNGTFPLPG-IHQSQDALCTCPKLPHQGSFQIDEFVHTESSSTKMQLVKQRLETVT----------EVIRSCAAKVNKNLSFTSPPAVSSQQSKLKQSNMLTAQEI---------LHQFGFT-QTGIISIERKPCNH-----------QVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSI-GKGQEGYFPANHV 1106
The following BLAST results are available for this feature:
BLAST of TCONS_00023849-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AHI12.774e-17535.72Jouberin OS=Homo sapiens GN=AHI1 PE=1 SV=1[more]
back to top