TCONS_00023672-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023672-protein
Unique NameTCONS_00023672-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1412

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023672-protein ID=TCONS_00023672-protein|Name=TCONS_00023672-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1412bp
MNMAEEPDETWEEFYKTNQSISVHPSRITTENGRSGQPYCFCLNVTSVEL
NSKSEEGTEFQLRVTFYDAANHYFFGSSWIGPIIKSEPISPGKHVIDFQE
AIYFHTSINDVTIMLIFELVDAANPALETVGWTWLRIFSYYDTLTDINET
ARPQERKLDFYHGSPIALLQIPEPLEEFQQLRKVNMCMMLYTLQIHEQME
SVISFVPANVPISGDDIIPGIEENTDDDSIIDILRSPLPLRTWPCHLNKL
TVTLPPSIDRFEEYLCTVLNNERLQKDELQPDGSVVKIAERKLKVGVHNG
WQFVQPPHIVYLEKDTNQTSPNKFKRSTSRQSSRPESSLSNYGTNYVGLM
LRSRLELNEMIHHPLFAIVFLLEYVVNIPVSQPDIPGGKKVKSKLGSSFG
SIPLAKKISIGIRVAAWSPFQNGMLSNQTITLDLKSYLPDNPFDQMVFTS
DLELDDMHFDSFGRIEFNFHQTKAKRRESSLNRSMTRDIIGKSTDELIPL
PMTPVNQIVDNRMTPQDPGNINLLNAKPPLPYQGQYRMSPRGLQHQQQQQ
PGFGQPVQHVEPQYLEELPRKQLYSSLIVPATDAPHMAALSRVAHSLLYT
IEYPKVTDAQGNAPFIINPEERITYNFSLENRDPLHTNEIVLQFLAVSRC
NNRSVFFTFQFYRFPQTTTERLHLKKLEGDITSDNTHPSILQRSARDGQP
SDNSPPGLLIKYTVDPAYMQAGEKQTFLKYLLEQKLYIDMWDGDSMLLIG
STSTPLKYLLRQSQPAVQVSQELDVVYTEYAEDHPMLAGDINKTGLPTGI
KVALKAKLCMRMANVGYIPETNLEKMEELNKSVQTIVLQPTKGIMERTDR
CKPSMKTSAKLMSDCDSELASVLLTKKQNTMMGKTNRMKKENIDKIRKRK
MDRMNAVRQIEGTNEMASGFILMKEEKVQRTRDLRTIQMYRDKVKGDNIQ
AKLEDSITTEHILHASLGRTEFFEFSLKNPSNRDQVVFIKTNDEELKVIT
NPKEWRHFKKLYDLNTAMEEQMFSNSTEEGVKLFLRANENVHVPFKFQSF
TSFNATPEMGPSHPLYVQSHTYSLQTFGKDTTLSSKQIKVSFTGNEMKPL
AFLQLTIELHPHTIDQTFRFYHPEQAFLKKAIRLPPLHSIPGSSVNKTEK
TSTLVTARCSDQTVICETHQVVSGEPQEIFLKVPCGISPNIKRFFVIVFI
DDFCIKPCQIWQFYVHSLQRVDLTATEGQTSQLSILLKGTQSSRMVKCFP
SHPAEIKISPSDSFMLMANGIQEISLKVNPLMAGRRMMFLNVVDQEFHQL
VKSWLLMITCTEPVITKAFEVRQLVGGGAGSNKKISFTNPYPVKKTFKFH
TNRLDLLKFKENGVMLGGGESHNICLCFLPQQSEGHSNVLVFINDRDGKN
EETFCIKVIYCR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013296XLOC_013296Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023672TCONS_00023672Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 950..1139
e-value: 0.14
score: 11.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1315..1408
e-value: 0.019
score: 14.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..705

Blast
BLAST of TCONS_00023672-protein vs. Swiss-Prot (Human)
Match: NPHP4 (Nephrocystin-4 OS=Homo sapiens GN=NPHP4 PE=1 SV=2)

HSP 1 Score: 808.135 bits (2086), Expect = 0.000e+0
Identity = 514/1413 (36.38%), Postives = 754/1413 (53.36%), Query Frame = 0
Query:   58 TEFQLRVTFYDAANHYFFGSSWIGPIIKSEPISPGKHVIDFQEAIYFHTSINDVTIMLIFELVDAA---NPALETV--GWTWLRIFSYYDTLTDINETARP----QERKLDFYHGSPIALLQ--IPEPLEEFQQLRKVNMCMMLYTLQIHEQMESVISFVPANVPISGDDIIPGIEENTDDDSIIDILRSPLPLRTWPCHLNKLTVTLPPSIDRFEEYLCTVLNNERLQKDELQPDGSVVKIAERKLKVGVHNGWQFVQPPHIVYL--EKDTNQTSPNKFKRSTSRQSSRPESSLSNYGTNYVGLMLRSRLELNEMIHHPLFAIVFLLEYVVNIPVSQPDIPGGKKVKSKLGSSFGSIPLAKKISIGIRVAAWSPFQNGMLSNQTITLDLKSYLPDNPFDQMVF---TSDLELDDMHFDSFGRIEFNFHQTKAKRRESSL----NRSMTRDIIGKSTDELIPLPMTPVNQIVDNRMTPQDPG-NINLLNAKPPLPYQGQYRMSPRGLQHQQQQQPGFGQP------VQHVEP--------------QYLEELPRKQLYSSLIVPATDAPHMAALSRVAHSLLYTIEYPKVTDAQGNAPFIINPEERITYNFSLENRDPLHTNEIVLQFLAVSR----CNN----RSVFFTFQFYRFPQTTTERLHLKKL-EGDITSDNTHPSILQRSARDGQPSDNSPPGLLIKYTVDPAYMQAGEKQTFLKYLLEQKLYIDMWDGDSMLLIGSTSTPLKYLLRQSQPAVQVSQELDVVYTEYAEDHPMLAGDINKTGL--PTGIKVALKAKLCMRMANVGYIPETNLEKMEELNKSVQTIVLQP-----TKGIMERTDRCKPSMKTSAKLMSDCDSELASVLLTKKQNTMMGKTNRMKKENIDKIRKRKMDRMNAVRQIEGTNEMA---SGFILMKEEKVQRTRDLRTIQMYRDKVKGDNIQAKLEDSITTEHILHASLGRTEFFEFSLKNPSNRDQVVFIKTNDEELKVITNPKEWRHFKKLYDLNTAMEEQMFSNSTEEGVKLFLRANENVHVPFKFQSFTSFNATPEMGPSHPLYVQSHTYSLQTFGKDTTLSSKQIKVSFTGNEMKPLAFLQLTIELHPHTIDQTFRFYHPEQAFLKKAIRLPPLHSIPGSSVNKTEKTSTLVTARCSDQTVICETHQVVSGEPQEIFLKVPCGISPNIKRFFVIVFIDDFCIKPCQIWQFYVHSLQRVDLTATEGQTSQLSILLKGTQSSRMVKCFPSHPAEIKISPSDSFMLMANGIQEISLKVNPLMAGRRMMFLNVVDQEFHQLVKSWLLMITCTEPVITKAFEVRQLVGGGAGSNKKISFTNPYPVKKTFKFHTNRLDLLKFKENGVMLGGGESHNICLCFLPQQSEGHSNVLVFINDRDGKNEETFCIKVIY 1410
             E  LRV+F+D    +FFG +W    +K     P +  I F E +YFHTS+N   I+ + E+V      + +L+T+  G+  LRIFS        N+   P    Q+++L  YHG+P ALL   + +P E+ + +  +  C + YTL+ H  +E     +P N+ +SG   IPG+     +    D LR P   +    HL+ L  TL PS+++FEE L  +   +  Q+     DG  ++I ER+L+VGVHNG  FVQ P +V L  E D   T    F        SR   S S   +    L+LRSRL L EM+ HP FA++F LEYV + P     + G     + L S+   + +       +R A W+P       +  +TL L+  +  NP   +V+   ++ +  +++     G + F F     +  ++         + R    K        P      +   + +P  PG +I+ L A P  P Q         L H  Q  P   Q       + H+E               + L+ELP   L++ ++V           SR +  LL +  +P++ DA       ++  E +T+N   E  D L +NE+VLQFLA SR    C      ++V+FTFQFYRFP  TT RL L +L E    S      IL   +RDG   D   PG  ++Y V P +++ GE++ F +YL  Q L ID+WDGDS+LLIGS +  +K+LLRQ +PAVQ S EL+VV TEY +D+ +++GD+   G   P G+   +K +L + +ANVG+  E  +     L  S   ++        + G +  T   +      A+ ++D DSELA++LLT  +    GK  +      D  R+RK++RM +VR  E   ++    +  +  +  + Q  RDL+ I  YR++ K ++I + L  +ITTEH LHA+LG  EFFEF LKNP N    V ++ ++ EL VI + +EWR FK    L+T +EE MF        +L+LR +E  HVPFKFQSF++      M  + P           +  K + + +K  KV F  +  KP+A L LT+EL PH +DQ FRFYHPE +FLKKAIRLPP H+ PG+ V    +    V  RCSD  VICET  V  GEP++IFLKV  G SP IK FFVI++ D +   P Q WQ Y+HSLQRVD++   GQ ++LS++L+GTQ+ R V+ F SHP E+K  P   F+L   G+Q++ + V PL AG R + LN+VD + HQLV SWL+ + C +P+I+KAFE+    G G G NK+I++TNPYP ++TF  H++  +LL+F+E+   +GGGE++ I L F P Q  G   +L++IND + KNEE FC+KVIY
Sbjct:   54 VECHLRVSFFDVTYRHFFGRTW-KTTVKPTKRPPSR--IVFNEPLYFHTSLNHPHIVAVVEVVAEGKKRDGSLQTLSCGFGILRIFS--------NQPDSPISASQDKRLRLYHGTPRALLHPLLQDPAEQNRHMTLIENCSLQYTLKPHPALEPAFHLLPENLLVSGLQQIPGLLPAHGESG--DALRKPRLQKPITGHLDDLFFTLYPSLEKFEEELLELHVQDHFQEGCGPLDGGALEILERRLRVGVHNGLGFVQRPQVVVLVPEMDVALTRSASF--------SRKVVSSSKTSSGSQALVLRSRLRLPEMVGHPAFAVIFQLEYVFSSPAG---VDGNAASVTSL-SNLACMHM-------VRWAVWNPLLEA--DSGRVTLPLQGGIQPNPSHCLVYKVPSASMSSEEVKQVESGTLRFQFSLGSEEHLDAPTEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLAASPRSPTQHCLARPTSQLPHGSQASPAQAQEFPLEAGISHLEADLSQTSLVLETSIAEQLQELPFTPLHAPIVVGTQTRSSAGQPSRASMVLLQSSGFPEILDANKQPAEAVSATEPVTFNPQKEESDCLQSNEMVLQFLAFSRVAQDCRGTSWPKTVYFTFQFYRFPPATTPRLQLVQLDEAGQPSSGALTHILVPVSRDGT-FDAGSPGFQLRYMVGPGFLKPGERRCFARYLAVQTLQIDVWDGDSLLLIGSAAVQMKHLLRQGRPAVQASHELEVVATEYEQDNMVVSGDMLGFGRVKPIGVHSVVKGRLHLTLANVGHPCEQKVRGCSTLPPSRSRVISNDGASRFSGGSLLTTGSSRRKHVVQAQKLADVDSELAAMLLTHARQ---GKGPQDVSRESDATRRRKLERMRSVRLQEAGGDLGRRGTSVLAQQSVRTQHLRDLQVIAAYRERTKAESIASLLSLAITTEHTLHATLGVAEFFEFVLKNPHNTQHTVTVEIDNPELSVIVDSQEWRDFKGAAGLHTPVEEDMFHLRGSLAPQLYLRPHETAHVPFKFQSFSAGQLA--MVQASPGLSNEKGMDAVSPWKSSAVPTKHAKVLFRASGGKPIAVLCLTVELQPHVVDQVFRFYHPELSFLKKAIRLPPWHTFPGAPVGMLGEDPP-VHVRCSDPNVICETQNVGPGEPRDIFLKVASGPSPEIKDFFVIIYSDRWLATPTQTWQVYLHSLQRVDVSCVAGQLTRLSLVLRGTQTVRKVRAFTSHPQELKTDPKGVFVLPPRGVQDLHVGVRPLRAGSRFVHLNLVDVDCHQLVASWLVCLCCRQPLISKAFEIMLAAGEGKGVNKRITYTNPYPSRRTFHLHSDHPELLRFREDSFQVGGGETYTIGLQFAPSQRVGEEEILIYINDHEDKNEEAFCVKVIY 1425          
The following BLAST results are available for this feature:
BLAST of TCONS_00023672-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPHP40.000e+036.38Nephrocystin-4 OS=Homo sapiens GN=NPHP4 PE=1 SV=2[more]
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