TCONS_00023623-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023623-protein
Unique NameTCONS_00023623-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length925

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023623-protein ID=TCONS_00023623-protein|Name=TCONS_00023623-protein|organism=Clytia hemisphaerica|type=polypeptide|length=925bp
MAASSGGGGRQKAIQNSDANIHHSASKPIQSMKLFTEYDVETAAPNCIPR
SCCLRVVRLQVFKALESELKALVICVAMQGSRRSLRSDQIPVLPSGTLDV
ELDLLFTLQYPHFLKRRENHLQITLQRRKKYRNRTILGYKNLAVGRVNMA
QVLQGWFSKELHLYTKDKKSPVATLTIATMSSDPIDRDVDRDRRLAGGAD
PESSDEEGDDDSYSSDVDDSAGEMERDEYSRQQMRRSKAQSRNLKQKIVQ
ALFKKLKASEGELEDVQQELQEEDFELVEDEGLYFDVESNDSENDDDILD
DNTSIASAKRPGLRPYFDHSKSQTTLNQTSLTHEEAAALKRAVDTALREN
GSPDDASDDPKSDLESRYFMERRDSSPHTTDDVTTAATEPQQQQQQQMQP
SKQELSKKWSADPDSLFKEPVSRYQDQLLSVFGTDDKLPDHMLMVAIKDD
FCQNLAMKLKARIGTVLSTTCMADVQATIAAVINKFQKYCSRHSTSPPPL
RIGVMGPESYVRHVLKTYVEHFSNKPXVFGTDDKLPDHMLMVAIKDDFCQ
NLAMKLKARIGTVLSTTCMADVQATIAAVINKFQKYCSRHSTSPPPLRIG
VMGPESYVRHVLKTYVEHFSNKPQDYQSFVRFLIIPTAQNKVSNYLSSID
MKYNSLFMDQFWKNVFLQPYLSEQDMREVEKRITQYLEHAEIVHPVPIAE
ALITARLPEESDSSQFFLPFVTEVRMGCNEAPVHDVDSDSGGAKDSTISM
ESKGSSSLTSSPRSVEASDPRSPSLSGHCYSENLDLMVDYWPLTNTSQLQ
LQSKEKQKEVNKMTIKSTFRSLSVSRLPLPDCEDTNGLVFNAHLKNRNKG
VKRLMTKRDKESEAISVPVNKLVCTARNSGHTFNVWIDGKEWNNVKFFSL
SHQWPTHIKQFPIGLFLNYGDVDQT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013273XLOC_013273Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023623TCONS_00023623Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019381Phosphofurin_acidic_CS-1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..276
IPR019381Phosphofurin acidic cluster sorting protein 1PFAMPF10254Pacs-1coord: 426..526
e-value: 1.8E-26
score: 93.0
coord: 528..916
e-value: 1.2E-109
score: 367.0

Blast
BLAST of TCONS_00023623-protein vs. Swiss-Prot (Human)
Match: PACS2 (Phosphofurin acidic cluster sorting protein 2 OS=Homo sapiens GN=PACS2 PE=1 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 1.116e-69
Identity = 182/560 (32.50%), Postives = 293/560 (52.32%), Query Frame = 0
Query:   32 MKLFTEYDVETAAPNCIPRSCCLRVVRLQVFKALESELKALVICVAMQGSRRSLRSDQIPVLPSGTLDVELDLLFTLQYPHFLKRRENHLQITLQRRKKYRNRTILGYKNLAVGRVNMAQVLQ--GWFSKELHLYTKDKKSPV--ATLTIATMSSDPIDRDVDRDRRLAGGADPESSDE--------------EGDDDSYSSDVDDSAGEMERDEYSRQQMRRSKAQSR--NLKQKIVQALFKKLKASEGELEDVQQELQEEDFELVEDEGLYFDVESNDSENDDDI-LDDNTSIASAKRPGLRPYFD---HSKSQTTLN--QTSLTHEEAAA-----------------------LKRAVDTALRENGSPDDASDDPKSDLESRYFMERRDSSPHTTDD----VTTAATEPQQ----------QQQQQMQPSKQE---LSKKWSADPDSLFKEPVSRYQDQLLSVFGTDDKLPDHMLMVAIKDDFCQNLAMKLKARIGTVLSTTCMADVQATIAAVINKFQKYCSRHSTSPPPLRIGVMGPESYVRHVLKTYVEHFSNK 525
            M LF  ++V+ ++P+C+PR C L + +L VFK LE EL ++VI V MQGS+R LRS +I + PSG ++ +L L F+LQYPHFLKR  N LQI LQRRK+Y+NRTILGYK LA G ++MA+V+Q      + L L +  K++PV  A + IA++SS PID +   D  +  G   +S+D                 DD     D+D+   ++ + +  R+ + R+ + +R  N KQK+V AL ++ K S+ E+ D +Q+  E   E  ED  L +D    +  +D    ++D+ S+ S  +P LRPYF+   HS SQT +    ++ +H+E  +                       +   V       G P+D+ +   S L+   F ER   S   T      + +  +E +Q          +++Q  +P  +    L  +   D  S  + P     DQL  +  +DD+LP+++++V   D   Q L+  L+     V+ T   ADVQA  + ++++ Q+YC+ +S  P P++I V G + Y+  +L+ +VE  S+K
Sbjct:   22 MNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHE---DSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIVRTTSMTRQQNFKQKVV-ALLRRFKVSD-EVLDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADVPEKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLD--VFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHK 574          

HSP 2 Score: 233.802 bits (595), Expect = 1.684e-64
Identity = 143/412 (34.71%), Postives = 229/412 (55.58%), Query Frame = 0
Query:  528 VFGTDDKLPDHMLMVAIKDDFCQNLAMKLKARIGTVLSTTCMADVQATIAAVINKFQKYCSRHSTSPPPLRIGVMGPESYVRHVLKTYVEHFSNKPQDYQSFVRFLIIPTAQNKVSNYLSSIDMKYNSLFMDQFWKNVF--LQPYLSEQDMREVEKRITQYLEHAEIVHPVPIAEALIT--ARLPEESDSSQFFLPFVTEVRMGCNEAPVHDVDSDSGGAKDSTISMESKGSSSLTSSPRSVEASDPRS--------------PSLSGHCYSENLDLMVDYWPLTNTSQLQLQSKEKQKEVNKMTIKSTFRSLSVSRLPLP-DCEDTNGLVFNAHLKNRNKGVKRLMTK-RDKESEAISV---PVNKLVCTARNSGHTFNVWIDGKEWNNVKFFSLSHQWPTHIKQFPIGLF 916
            +  +DD+LP+++++V   D   Q L+  L+     V+ T   ADVQA  + ++++ Q+YC+ +S  P P++I V G + Y+  +L+ +VE  S+K  D+  ++RFL+IP   + V+ YL S+D +YN+ F D  W+++F  L+   + QD  ++  RITQY+  A   H +PIAEA++T   + P+E +SSQ F+PFV  V++G     V    + SG + D+  S    GS +L+S+P S   +   +               S S    +E + L VDYW     +  +  +++K   V K T+K TFRSL VSRLP   +   T  +      K +NK V  L  K +DK+ E+ S     +++L+CTAR   +   V IDG E ++VKFF L+ QW +H+K FPI +F
Sbjct:  480 ILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQKSPDE-ESSQKFIPFVGVVKVGI----VEPSSATSGDSDDAAPS----GSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKVMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIF 882          
The following BLAST results are available for this feature:
BLAST of TCONS_00023623-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PACS21.116e-6932.50Phosphofurin acidic cluster sorting protein 2 OS=H... [more]
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