TCONS_00023520-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023520-protein
Unique NameTCONS_00023520-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length694

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023520-protein ID=TCONS_00023520-protein|Name=TCONS_00023520-protein|organism=Clytia hemisphaerica|type=polypeptide|length=694bp
MWGRYETINVLIDNGANIAVKDDDDMSALDYAEDAEKHKKECIDALTRYR
CNKRRNDGFKSKTRMNLNKILGGHVEFSTFLTEKGNTSEDDSKHKSFDNN
SSILSDITNLVQEDFDPSDSGEEELLANETLFQTCNESMMHNIASSTMIE
GTDGCFPIDKSENLTSSLGYLGDRSSRSSHKSSTSSSTSSSSSTSFGGVG
SADETFWSCHGGNTFLRSDREDKDATLPPIRRKRNKSHYFVPLSSSAPSL
NGEESNQGEEEHSIVEDEKQATLEETPVPVDRETPEREIFPEEREMIENM
SNLLNSSEAGNETFTENNINLAQEATVNYSGENSWDISKLIDYYEDQTKS
DEFNPNQSILAESPSKTLKSSHFVIINCRESVPNHQRRSIDELSSITVSY
DWKDVSQMTATQELDENIVEVSPSVLALTNMELKDQLISLGEKPGPISDT
TRRVYQKHLVRIQQASTTGSHGDQKSKKEEKQLKDYTNEMRQIFLNTLTL
PKDKGDSLEQEMSFVFENPEKHTWREGTQKTSFNYILLDPRVTKNLADRG
ETMSFTEQFRTFVSAIFYIGKGKKSRPYEHFHEAAKYLRPDNKQSKPSNK
SNMVLDIWEQGYGVTTLHLFHSVIPVEAYTREACMIDAMSLSRLTNAKHG
DFYGPASSWSTKKKRLLGIHLLMKALKIYLIEGERQIKQRDLTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013218XLOC_013218Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023520TCONS_00023520Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003887LEM_dom
IPR011015LEM/LEM-like_dom
IPR020683Ankyrin_rpt-contain_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 476..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..198
NoneNo IPR availableCDDcd00204ANKcoord: 1..57
e-value: 2.13806E-5
score: 42.3707
NoneNo IPR availableCDDcd12934LEMcoord: 428..461
e-value: 5.10098E-11
score: 57.7994
NoneNo IPR availableCDDcd10454GIY-YIG_COG3680_Metacoord: 532..646
e-value: 1.48342E-56
score: 187.894
IPR003887LEM domainSMARTSM00540lem_2coord: 423..466
e-value: 7.1E-7
score: 38.8
IPR003887LEM domainPFAMPF03020LEMcoord: 427..461
e-value: 8.4E-13
score: 47.5
IPR003887LEM domainPROSITEPS50954LEMcoord: 422..466
score: 13.039
IPR011015LEM/LEM-like domainGENE3D1.10.720.40coord: 424..466
e-value: 3.3E-13
score: 48.4
IPR011015LEM/LEM-like domainSUPERFAMILY63451LEM domaincoord: 423..467
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..52
e-value: 6.8E-6
score: 25.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..32
score: 9.304
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 2..56

Blast
[Close]
BLAST of TCONS_00023520-protein vs. Swiss-Prot (Human)
Match: ANKL1 (Ankyrin repeat and LEM domain-containing protein 1 OS=Homo sapiens GN=ANKLE1 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 9.946e-56
Identity = 104/270 (38.52%), Postives = 155/270 (57.41%), Query Frame = 0 
Query:  425 VLALTNMELKDQLISLGEKPGPISDTTRRVYQKHLVRIQQASTTGSHGDQKSKKEEKQLKDYTNEMRQIFLNTLTLPKDKGDSLEQEMSFVFENPEK-HTWREGTQKTSFNYILLDPRVTKNLADRGETMSFTEQFRTFVSAIFYIGKGKKSRPYEHFHEAAKYLRPDNKQS-KPSNKSNMVLDIWEQGYGVTTLHLFHSVIPVEAYTREACMIDAMSLSRLTNAKHGDFYGPASSWSTKKKRLLGIHLLMKALKIYLIEGERQIKQRDL 692
            V  ++++EL   L +LGE P PI+  TR++Y + L   Q A                +   ++ E+    L T  +P  + D  E  ++  FE P+    WREG  K+SF Y+LLDPR T++L  R  +++  E+ +TF+ AIFY+GKG ++RPY H  EA  +     KQ  +   K   +LDIW  G GV +LH F  V+ VEAYTREAC+++A+ +  LTN K G  YG  + W   ++R LG+HLL +AL ++L EGERQ+  +D+
Sbjct:  358 VSTVSDLELLKGLRALGENPHPITPFTRQLYHQQLEEAQIAPG-------------PEFSGHSLEL-AAALRTGCIPDVQAD--EDALAQQFEQPDPARRWREGVVKSSFTYLLLDPRETQDLPARAFSLTPAERLQTFIRAIFYVGKGTRARPYVHLWEALGHHGRSRKQPHQACPKVRQILDIWASGCGVVSLHCFQHVVAVEAYTREACIVEALGIQTLTNQKQGHCYGVVAGWPPARRRRLGVHLLHRALLVFLAEGERQLHPQDI 611
The following BLAST results are available for this feature:
BLAST of TCONS_00023520-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANKL19.946e-5638.52Ankyrin repeat and LEM domain-containing protein 1... [more]
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