TCONS_00023518-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023518-protein
Unique NameTCONS_00023518-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length408

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023518-protein ID=TCONS_00023518-protein|Name=TCONS_00023518-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MMSVYKIGFIVALTTCFVFGSTEASKQKFVVHGNTISRNRQEVDAKPYSL
NPSFKKPSYMRHITARKHIPATDVILPCMATGVKPITYSWRFNGKPLSKR
KRLKFTDDSSILKIRRIRNSEVGIYTCIAKNAYGSLSFDFKIRIKEIQKE
PMFYDLPTMQRKQMDIRPTKTSIKMECKAFSSAPVHYVWLKNGKPFKHIK
PPATNVLLKKIKAVPQQTGDLSINYLKVNDGGLYTCIAFNKYGNASFTYE
LRILRRRMGGPPKVIPYTRPQIINTTVGQNVSMDCLEIISGTLPHVQWFH
LSNPTDNSLLPTIPKNMNWLDINNPKNGFKSKYIPARKYESFKIKDLHPK
TKNEYVYDNTDPYGLRLNLNRVRKEDTGVYVCYVSNSEGSDYTQFYLIVN
DDVISNAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013217XLOC_013217Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023518TCONS_00023518Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013098Ig_I-set
IPR013783Ig-like_fold
IPR013151Immunoglobulin
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 270..400
e-value: 2.7E-9
score: 46.9
coord: 66..145
e-value: 0.073
score: 22.2
coord: 162..254
e-value: 0.0011
score: 28.2
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 276..389
e-value: 3.1E-5
score: 33.4
coord: 69..134
e-value: 3.1E-8
score: 43.4
coord: 168..243
e-value: 0.001
score: 28.4
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 73..142
e-value: 1.7E-10
score: 40.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 48..154
e-value: 4.6E-16
score: 58.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 155..254
e-value: 2.9E-13
score: 49.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 264..401
e-value: 3.8E-13
score: 49.3
IPR013151ImmunoglobulinPFAMPF00047igcoord: 343..393
e-value: 3.1E-5
score: 24.0
NoneNo IPR availablePIRSFPIRSF000615TyrPK_CSF1-Rcoord: 16..326
e-value: 4.3E-10
score: 36.3
coord: 331..407
e-value: 0.0024
score: 13.9
NoneNo IPR availablePFAMPF13927Ig_3coord: 168..240
e-value: 2.3E-8
score: 34.4
NoneNo IPR availableCDDcd00096Igcoord: 358..391
e-value: 5.53285E-4
score: 36.6983
NoneNo IPR availableCDDcd00096Igcoord: 74..137
e-value: 6.01799E-11
score: 57.1139
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 151..252
score: 9.882
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 57..143
score: 10.499
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 262..393
score: 8.666
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 168..254
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 352..401
coord: 267..312
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 71..147

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023518-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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