TCONS_00023485-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023485-protein
Unique NameTCONS_00023485-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023485-protein ID=TCONS_00023485-protein|Name=TCONS_00023485-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
FDFNLFLTCYLLWTFNSNNFCYAVNDYYYTMFEKTIIKGMDPVLETNTTS
VLECQLLSQHPTRFMINVLKVFDHWYHCRIFMNKKSPNMDKEYFQDHTNS
TVYILDKPKPKDCQDWKTLGYDKDGLYDIAIDRKSVQVWCDMTNFDGGWI
VFQKRFNNSVDFNRDWEEYKDGFGQINGGEFWLGNEYLYRLTWGKSVQFI
FEVEDTDGVTRYGRHDSFFISSEDDFYRMSSDMRVMDGMGGFGLVKGQPF
STTGSDHDSWPYGNCADRFQGGWWYNDCGTAFFNGINDPSVEFYGIRFTA
WNNLKDKVRTKMMIKVA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013202XLOC_013202Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023485TCONS_00023485Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
IPR020837Fibrinogen_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 108..317
e-value: 1.9E-33
score: 127.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 110..315
e-value: 4.6E-42
score: 144.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 104..317
score: 39.664
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 107..309
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 251..309
e-value: 1.5E-13
score: 50.2
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 73..250
e-value: 3.2E-42
score: 144.2
IPR020837Fibrinogen, conserved sitePROSITEPS00514FIBRINOGEN_C_1coord: 273..285

Blast
[Close]
BLAST of TCONS_00023485-protein vs. Swiss-Prot (Human)
Match: ANGL1 (Angiopoietin-related protein 1 OS=Homo sapiens GN=ANGPTL1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.474e-32
Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 0 
Query:  111 KDCQDWKTLGYDKDGLYDIAIDRKS--VQVWCDMTNFDGGWIVFQKRFNNSVDFNRDWEEYKDGFGQINGGEFWLGNEYLYRLTWGKSVQFIFEVEDTDGVTRYGRHDSFFISSEDDFYRMSSDMRVMDGMGGFGLV--KGQPFSTTGSDHDSWPYGNCADRFQGGWWYNDCGTAFFNGI 286
            KDCQ  K  G+   G+Y I  +  +  +Q+WC+ +   GGW V QKR + SV+F R+WE YK GFG I+ GE+WLG E +Y L+   + + + E+ED      Y  + SF +  E +FYR+   +    G  G  ++   G+ F+T   D D +  GNCA   +GGWWYN C  +  NG+
Sbjct:  278 KDCQQAKEAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKGFGNID-GEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLR--LGTYQGNAGDSMMWHNGKQFTTLDRDKDMYA-GNCAHFHKGGWWYNACAHSNLNGV 453
The following BLAST results are available for this feature:
BLAST of TCONS_00023485-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGL15.474e-3238.33Angiopoietin-related protein 1 OS=Homo sapiens GN=... [more]
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