TCONS_00023231-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023231-protein
Unique NameTCONS_00023231-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2069

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023231-protein ID=TCONS_00023231-protein|Name=TCONS_00023231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2069bp
MHTRSKMVTKTSIKVFFFLLCISAWFNPSEGNHGELSTQDLNDYMQDVLA
EYQVGLRKTAFEKAPLRKRRSLDGDLQPENETKTYQTEISEIIPWATIPT
THPMQLDPFTIANEQYLTAVNFADQTGQHATKSTIYKLNTTSEKFEKFQD
FSTSGAVDFHYVHDSTYSYAIFVDQIGKGLGGYGETYQQSFQLNQYQPEF
RPPFQYRSRVGTLGATRVNVFDKGGYKFYLTANSYSERGNRYQVQSTLHV
QLRRGFQLLQSFDTLGAQDVEVALIDNLRYIFFANHQDNSGSTDIYSYVY
KEKEEHELTYQDNFAPYGLYQRIPTHGAKDFEYFTYNGHHYLVVCNEYTR
RVVYTVDYRQEYQKDYTIESVIFWWTGNLWVEWQRIPTNGAVKATYFVSE
FGDPMLVIANAKAQATIYTYDVVKGIFKPTMVQGLSPHPDNSSFIPDVRS
VSVFSAFNETFITVANYALESRNGTNIFKVQFVRNETESSAQTVPQMIKD
LLERMKQELTEVKEDLESQLNPIINQVLTKTTNQTLDTELHISGNNINIT
NLQTEDVLYTGQVTPNPIKELAIKAAELKEKVTQDESTISTLQQQMIDLV
DLDHNNVTINGKKTFETIEANNVNIEEAYVTGLVDGTNVTDLHQHGLQNT
VAQTITGQYTFNEVVNFTRDLTVENQINDLYINEILTKTRNQTISGHLNF
TDNVLIRNENLELYNNTVNGIRFENVLTLNTEQIISGRKTYIGVNFRTLE
TVGKVDGVNISDFAANKVSLTGSDILTKSIIFTNGFNVSSDVNVGGYVDG
ANITALWQSANSDQNIDEEIQGSKIFQNVTVKGQCNIESVNGKDFDNLAL
KNQTNNFTGKVVFNENVTVQEHLITSSNSTINNLIFQTDLVLSDGSHIIT
GHKTFESIHLMENVTIHGDINGVDLKTFVETVVQKGDNRTVTGKKHFHST
VNAEQLLTELVNNINVEELLNNVLVLVNGTKINASMVKFQSLNISSVRVE
GTVNGLKIPDDLVLLSTIQHIEGSKTFTNNVTILNIHSINVIGDEDFSKF
LREAAQNLPGQIVEANVTFKNSVTFTDEITTEKLNGQSVDNWLTTNTEQN
ITGTIRLLNDTTFTSSITTDVVDITGKVNGIDISDLEASAIYKNTSETIN
NTRLVFVNGIDCKQNLSVAGLINGVNLTELYHNTVRISKNQTVAGEKVFT
NTVILKDTLTTSGTINNINLTKLEQDSLKTVGEETLLGNVTFINNVIVNG
TLNAGGSIDGTDLNEFLENAAFVDSNGTLSINGSLTFNNVTANTVHTSTG
VNGLSLNDILLQGVNQTLSGNVSFTNVSASSIQTELINGENLTDVFGKAL
KTTGDQNITGTYIFNDLFVEENLAIKTVNGVDFDGFLESAVPTNETSTLQ
GIIRFTSDVVIDQLETTKSLGDVNITRMLTDTLLKTGNQTICHQMEFENL
TVGDGEFKGDVKTDLINNVNITKLYFDAVYLYNYTEQDIQGNLEFEELTV
SQYVKADKINGFDLSNDFLLTTGNQAVSSNVKFNNSVVFESILVSTGFVD
GVNLYQLDQDRIDLYDNITISGLKSFNNVSMTEIIVTDTSTVNGILPSDL
VEINKTSMLTGAKTVTNLTVDDIWVTGNINSVDLVDFNNLVLRRDRVPFQ
LRADQIFTKDLMINGSLNVTGYINGQLVNGNHNYEPNVGDEIQGQLDMYL
TNAGSLCGKISSLTTLAVAGAYLEGVEISSTIKLPSEDLGSIQSTIIEGK
HYISIARSEVTATCGSAYILECGEFPTCTVLQSIQTNAVLLEFFLYNNQS
ALLVDHEIANETYSQSGCNKTTAEIYLWSPTNRIFEPYQSVNEELMESDS
APIIDSKGLLKRSLNKKLKEERVTSNGNGHNKTEIIDIKTFESKGNKFLI
ASVAKGSGGYLDVMKGPGNNVGSLKKSQRIVINSGRKNYVSVGKLNGKPV
VSVSSSRRKDMKLHRFNQDTEKLEFYQQLPKAATSVKFQKVKQSEYILFA
SPETGFGLCPWQGASGYTDCEQLVSTDNNHVDTITNDSGAFVILGKPDSL
KIYRVVIEGSGNPFDGDVC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013066XLOC_013066Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023231TCONS_00023231Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005492EPTP
IPR009039EAR
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 499..519
NoneNo IPR availableCOILSCoilCoilcoord: 568..595
IPR005492Leucine-rich glioma-inactivated , EPTP repeatPFAMPF03736EPTPcoord: 96..139
e-value: 3.6E-5
score: 23.6
coord: 319..372
e-value: 4.8E-7
score: 29.6
IPR009039EARPROSITEPS50912EARcoord: 1773..1830
score: 5.778
IPR009039EARPROSITEPS50912EARcoord: 254..300
score: 7.751
IPR009039EARPROSITEPS50912EARcoord: 143..195
score: 5.621
IPR009039EARPROSITEPS50912EARcoord: 90..140
score: 8.087
IPR009039EARPROSITEPS50912EARcoord: 315..377
score: 10.754
IPR009039EARPROSITEPS50912EARcoord: 378..422
score: 5.711

Blast
[Close]
BLAST of TCONS_00023231-protein vs. Swiss-Prot (Human)
Match: TSEAR (Thrombospondin-type laminin G domain and EAR repeat-containing protein OS=Homo sapiens GN=TSPEAR PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.137e-18
Identity = 89/337 (26.41%), Postives = 145/337 (43.03%), Query Frame = 0 
Query:   82 TKTYQTEISEIIPWATIPTTHPMQLDPFTIANEQYLTAVNF-ADQTGQHATKSTIYKLNTTSEKFEKFQDFSTSGAVDFH-YVHDSTYSYAIFVDQIGKGLGGYGETYQQSFQLNQYQPEFRPPFQYRSRVGTLGATRVNVFDKGGYKFYLTANSYSERGNRYQVQSTLHVQLRRGFQLLQSFDTLGAQDVEVALIDNLRYIFFANHQDNSGSTDIYSYVYKEKEE-HELTYQDNFAPYGL--YQRIPTHGAKDFEYFTYNGHHYLVVCNEYTRRVVYTVDYRQEYQKDYTIESVIFWWTG-NLWVEWQRIPTNGAVKATYFVSEFGDPMLVIANAK 412
            +  Y+    + + +  IPT        FTI  + +L   NF  D+ GQ    S IYK +    KF  +Q  +T  A D+  +  D  +  A+   +        G+ +     + ++ P  R  F+    + T GA     F  G Y F + AN+++  G   +V S L+++L   FQL QSF T GA D EV  I    ++  A    NS S D+   V  +    + + Y+ N        +Q I T  A D+E+F+    ++LVV N +  R              +++ S+I+ W G   +V    +PT G      F +  G   L+ ++AK
Sbjct:  351 SAVYKWTEEKFVSYQNIPTHQAQAWRHFTIGKKIFLAVANFEPDEKGQEF--SVIYKWSHRKLKFTPYQSIATHSARDWEAFEVDGEHFLAVANHR-------EGDNHNIDSVIYKWNPATRL-FEANQTIATSGAYDWEFFSVGPYSFLVVANTFN--GTSTKVHSHLYIRLLGSFQLFQSFPTFGAADWEVFQIGERIFLAVA----NSHSYDVEMQVQNDSYVINSVIYELNVTAQAFVKFQDILTCSALDWEFFSVGEDYFLVVANSFDGRT-------------FSVNSIIYRWQGYEGFVAVHSLPTVGCRDWEAFSTTAG-AYLIYSSAK 657
The following BLAST results are available for this feature:
BLAST of TCONS_00023231-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSEAR3.137e-1826.41Thrombospondin-type laminin G domain and EAR repea... [more]
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