TCONS_00023113-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023113-protein
Unique NameTCONS_00023113-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length618

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023113-protein ID=TCONS_00023113-protein|Name=TCONS_00023113-protein|organism=Clytia hemisphaerica|type=polypeptide|length=618bp
MSFRKQSSSHSSTNKRQSSLSQQNKEKGDQINFQEVCKAAFISELNNLRE
EISSGEELMQLLQQVGCNPSKKTLSKYWTQETDGYNFKQFCGIAKQESQT
SKKDLIKAFQKIDKNGDGFITHDELFQVLTKRGERMTKAEVKSLIEDADF
NGDGRLDYEEFCDMMDSTAKKCQQRYMDAHHGNEADSHIHREESSKLFTS
SSQDEKKRNSTTKKKMSLKSSLNRENSLSSSTRGADLKDHAKDDGNKSSL
GVKLKEEPRDLNRWVFTSFRGCFYKEENGSVESHQYQMKVTQPSTVWLSI
KPTTPKYGKFNDEICESDMTVFIVERSSSNTLVAFTNSTIDGKSCLQVDL
DIGLYDILTFSSGAKLLEEESDSGQVNIVKGSGEDARLTKACKDTFLEIF
YRCDMDGNGYLNRDEFNEFQLRSSGEGCDNEAWEVVKENFEVTPTRELTP
NGFIDLNLMEARDPQGGPDELWITIESFGYSKKLQLSMACPFIMEVYTKK
GQNTVSLVGVSNGGPPLQSALSNAIMSIANKQSVKNKRDLHLLIAEFNQR
VTIAVQNQSHNIVGVRLDCSASENVLSHQNTLIISEDIEPKSLEIFHHLV
AENKNERMQLKYHESIER
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012988XLOC_012988Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023113TCONS_00023113Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableGENE3D1.10.238.10coord: 411..507
e-value: 5.2E-5
score: 22.7
NoneNo IPR availableGENE3D1.10.238.10coord: 118..153
e-value: 4.9E-18
score: 64.6
NoneNo IPR availableGENE3D1.10.238.10coord: 54..117
e-value: 4.0E-8
score: 32.5
NoneNo IPR availableGENE3D1.10.238.10coord: 154..410
e-value: 2.5E-13
score: 49.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
IPR002048EF-hand domainSMARTSM00054efh_1coord: 140..168
e-value: 4.8E-6
score: 36.1
coord: 104..132
e-value: 8.1E-5
score: 32.0
coord: 395..423
e-value: 8.0
score: 10.5
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 398..416
e-value: 0.015
score: 14.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 103..165
e-value: 1.7E-12
score: 47.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 391..426
score: 9.213
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 136..171
score: 13.704
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..68
score: 5.001
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..135
score: 14.848
IPR002048EF-hand domainCDDcd00051EFhcoord: 104..165
e-value: 9.20439E-20
score: 82.9809
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 113..125
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 404..416
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 149..161
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 387..457
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 55..165

Blast
[Close]
BLAST of TCONS_00023113-protein vs. Swiss-Prot (Human)
Match: EFCB7 (EF-hand calcium-binding domain-containing protein 7 OS=Homo sapiens GN=EFCAB7 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.150e-101
Identity = 205/631 (32.49%), Postives = 353/631 (55.94%), Query Frame = 0 
Query:    9 SHSSTNKRQSSLSQQNKEKGDQINFQEV----CKAAFISELNNLREEISSGEELMQLLQQVGCNPSKKTLSKYWTQETDGYNFKQFCGIAKQESQTSKKDLIKAFQKIDKNGDGFITHDELFQVLTKRGERMTKAEVKSLIEDADFNGDGRLDYEEFCDMMDSTAKKCQQRYMDAHHGNEADSHIHREESSKLFTSSSQDEKKRNSTTKKKMSLKSS----LNR---ENSLSSSTR----GADLKDHAKDDGNKSSLGVKLKEEPRDLNRWVFTSFRGCFYKEENGSVESHQYQMKVTQPSTVWLSIKP--TTPKYGKFNDEICESDMTVFIVERSSSNT---LVAFT---NSTIDGKSCLQVDLDIGLYDILTFSSGAKL---LEEESDSGQVNIVKGSGEDARLTKACKDTFLEIFYRCDMDGNGYLNRDEFNEFQLRSSGEGCDNEAWEVVKENFEVTPTRELTPNGFIDLNLMEARDPQGGPDELWITIESFGYSKKLQLSMACPFIMEVYTKKGQNTVSLVGVSNGGPPLQSALSNAIMSIANKQSVKNKRDLHLLIAEFNQRVTIAVQNQSHNIVGVRLDCSASENVLSHQNTLIISEDIEPKSLEIFHHLVAENKNERMQLKYH 613
            S ++ + ++S+ S+  + K   +  +E+    C+AA+++   +  E I S ++L   LQ  G NPS+KT++KYWT +T   NF  FC I ++E  TSK +L+K+F+++D N DG I H +L++ LTKRGE+MT+ EV ++I  AD N DG+ DY +FC +  +T ++C +  ++     E DS + R +       S + +         K++ K+     LN+    +SL S+TR              +GN++S   KL  EP  +  W     +GCF+ EE+G + SHQY+M++ Q S V+L+IKP   +   GK +  +   D  ++I++ + S     LV FT   N  + G +    +L  G+Y ++  ++G +L   ++  +D  Q+     +GE   LTK  K T  +IF   D+DGNG L+ +E+N F+LR+SGE CD +AW V +ENF+ T   ELT  GF+DLNLMEA D +G P +LW+T+ S GY+K L+L+ ACPF++++Y +K +  +  V +      L+ A+  +++S  + + +    ++ +     +  +T  ++N+S   V + +    S+N ++++   I + ++ PKS  +  H++    NER +  Y+
Sbjct:    7 SDATFSSQKSTPSESPRTKKFPLTEEEIFYMNCRAAYLTVFKSSLENIISKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTKRGEKMTREEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTTLEKL---EVDSKLMRHQFGNHIEGSPERDPSPVPKPSPKITRKTDPETFLNKGDTRSSLLSATRKFKTSVSFTVTMGANGNRNS---KLM-EPNLIKDWQHMQSKGCFFLEEDGEIISHQYRMQIAQRSMVYLTIKPLNLSQVEGKPSPWL-SVDTALYILKENESQANLQLVCFTELRNREVFGWT---GELGPGIYWLIPSTTGCRLRKKIKPVTDEAQLVYRDETGE-LFLTKEFKSTLSDIFEVIDLDGNGLLSLEEYNFFELRTSGEKCDEDAWAVCRENFD-TKRNELTRQGFMDLNLMEANDREGDPCDLWVTLHSMGYNKALELTEACPFVIDIYAEKCKPKIKAVHMEACSGQLEKAICKSVLSNGDAKVMDGYENIIVHTYSCDTWITSVIENKSDEKVIIHISNELSKNCINNRGLNIFAVEVGPKSTMVCQHVMP--LNERQEWIYY 622
The following BLAST results are available for this feature:
BLAST of TCONS_00023113-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EFCB79.150e-10132.49EF-hand calcium-binding domain-containing protein ... [more]
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