TCONS_00023063-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00023063-protein
Unique Name	TCONS_00023063-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1121

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00023063-protein ID=TCONS_00023063-protein|Name=TCONS_00023063-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1121bp
MSKKTTIDSIPQSPPCSIDNGEEDGEGCNDEIHSKTSSEINGPRGDFFGL
RSTTSTGKKRLYVDFNSSCVVLGWKRENKKYDLGYKFISTECKLVRTLLH
SHGFKETAQNSTNFNLMWSGSHVKPYSLRGLKVYQKFNHFPRSYELTRKD
RLYKNVQKMQHSKGLRHFDFIPQSFVLPTELNDFYAAFLKDRGPWIVKPC
ALSRGRGIFLVNNINKIPLDENVLVCRYINNPLLVNGYKFDCRIYVAVMS
YDPLRIYIYEEGLARFSTVKYEAGSSSNLQNQCMHLTNYSLNKFSDGYVR
CEDPEVDNYGSKWSFSAMLRHLKEEEGIDTKLLMARIEDVIIKTILAGEL
TIAIACKMFVPFPENCFELYGFDILVDSNLKPWLLEVNLSPSLACDAPMD
LKIKANLITDLFNMTGFLVEEPVTKTRKNSKNINFKNRENLLSATRRPST
HNNRHSNNTKQSNNKTTNLLHKPKDGLSKEERKMVWIAKEEYKNRGGFIR
VYPSPESWELYSSLQDHQTTNNRMLHSQLFPQLWNSGTTTQTTTYIARAR
NFSSISKPIFDSVTDSTVGNFYKRFLQYERKLGGWNTPQDSPQKQIHDLK
ASTRPPHRQRERIKQGELQSDDNNLYENKLLDGCHDYKANVQPEDVLKKA
QHLNKYQAREAFSVYLQRVQHRLLQEIGQSQDNYAYQKIDFEDLEKQEHQ
INLIHRFLMKAAVNLSNPINVIIPHQNLPIFERKRILARQLNDFIKVYRK
ESKILFEREEAEIACSIDQQAFNTFIAISSEQQLEDLLTVYTKHNKSASI
FLGAKSSSIKKSSTATADVARDDLSKSNPSTSQFQTTNTNMNRLKSGTSV
LSNHRPLSFKPPSTAKPPQXLSNHRPLSFKPPSTAKPPRSSGHTRYNKTS
RQSSRSSSANRHSRSLSEPDTNLDVDPHNRPFSTTSIERRLINQSTQRQR
GLSANSSRGSLRRATSQERIRSSNKDSIGGLRRVDSRERMRETVCVYTGS
NELLNQYQKQQREQPKIKEALRKLSNRQSQRTYSARSTNSIKQLNDRDQA
IRDYRDFLRRNEQFFRDNKNEDLLDESTDWDFSHQILAGKEDVIVHTPKP
PEEKKPSVMSSKSRFTRKMSK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012952	XLOC_012952	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00023063	TCONS_00023063	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004344	TTL/TTLL_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PFAM	PF03133	TTL	coord: 134..415 e-value: 2.2E-92 score: 309.3
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PROSITE	PS51221	TTL	coord: 80..427 score: 56.565
None	No IPR available	GENE3D	3.30.470.20		coord: 155..518 e-value: 4.2E-24 score: 85.0
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 327..413 coord: 162..264

Blast

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BLAST of TCONS_00023063-protein vs. Swiss-Prot (Human)
Match: TTLL5 (Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=TTLL5 PE=1 SV=3)

HSP 1 Score: 540.421 bits (1391), Expect = 5.505e-172
Identity = 253/457 (55.36%), Postives = 335/457 (73.30%), Query Frame = 0

Query:   78 NKKYDLGYKFISTECKLVRTLLHSHGFKETAQNSTNFNLMWSGSHVKPYSLRGLKVYQKFNHFPRSYELTRKDRLYKNVQKMQHSKGLRHFDFIPQSFVLPTELNDFYAAFLKDRGPWIVKPCALSRGRGIFLVNNINKIPLDENVLVCRYINNPLLVNGYKFDCRIYVAVMSYDPLRIYIYEEGLARFSTVKYEAGSSSNLQNQCMHLTNYSLNKFSDGYVRCEDPEVDNYGSKWSFSAMLRHLKEEEGIDTKLLMARIEDVIIKTILAGELTIAIACKMFVPFPENCFELYGFDILVDSNLKPWLLEVNLSPSLACDAPMDLKIKANLITDLFNMTGFLVEEPVTKTRKNSKNINFK-NRENLLSATRRP---STHNNRHSNNTKQSNNKTTNLLHKPKDGLSKEERKMVWIAKEEYKNRGGFIRVYPSPESWELYSSLQDHQTTNNRMLHSQLF 530
             ++Y L YK + T+ +LVR++L +HGF E   +ST++NLMW+GSH+KP+ LR L   QK NHFPRSYELTRKDRLYKN+ +MQH+ G + F  +PQ+F+LP E  +F  ++ KDRGPWIVKP A SRGRG++L+NN N+I L+EN+LV RYINNPLL++ +KFD R+YV V SYDPL IY+YEEGLARF+TV+Y+ G + N++NQ MHLTNYS+NK S  YV C+DPEV++YG+KWS SAMLR+LK +EG DT  LMA +ED+IIKTI++ EL IA ACK FVP   +CFELYGFD+L+DS LKPWLLEVNLSPSLACDAP+DLKIKA++I+D+F + GF+ ++P  +         F+ +R N     +R    S  +    N    +  K    L     GLS EE K++   KEE   RGGFIR++P+ E+WE+Y S  +H+T+ N ML ++LF
Sbjct:   60 GERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHLKPFLLRTLSEAQKVNHFPRSYELTRKDRLYKNIIRMQHTHGFKAFHILPQTFLLPAEYAEFCNSYSKDRGPWIVKPVASSRGRGVYLINNPNQISLEENILVSRYINNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQG-AKNIRNQFMHLTNYSVNKKSGDYVSCDDPEVEDYGNKWSMSAMLRYLK-QEGRDTTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFELYGFDVLIDSTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVVGFVCQDPAQRASTRPIYPTFESSRRNPFQKPQRCRPLSASDAEMKNLVGSAREKGPGKLGGSVLGLSMEEIKVLRRVKEENDRRGGFIRIFPTSETWEIYGSYLEHKTSMNYMLATRLF 514

HSP 2 Score: 94.3597 bits (233), Expect = 2.173e-19
Identity = 68/183 (37.16%), Postives = 108/183 (59.02%), Query Frame = 0

Query:  646 VLKKAQHLNKYQAREAFSVYLQRVQHRLLQEIGQSQDNYAYQKIDFEDLEKQEHQINLIHRFLMKAAVNLSNPINVIIPHQNLPIFERKRILARQLNDFIKVYRKESKILFEREEAEIAC-----SIDQQAFNTFIAISSEQQLEDLLTVYTKHNKSASIFLGAKSSSIKKSSTATADVARDD 823
            +L+   +L+K QAR AFS YLQ VQ RL+++ G        Q        K++ Q+ L+ RFL +A+ NL + + +++P + L + ER+RILA QL DFI VY KE++ + E++  +         ++ + F  FI  +SE +LE++LT YT+ NKSAS+FLG  S   K ++  +   A+ D
Sbjct:  664 ILQDNGNLSKMQARIAFSAYLQHVQIRLMKDSGG-------QTFSASWAAKEDEQMELVVRFLKRASNNLQHSLRMVLPSRRLALLERRRILAHQLGDFIIVYNKETEQMAEKKSKKKVEEEEEDGVNMENFQEFIRQASEAELEEVLTFYTQKNKSASVFLGTHSKISKNNNNYSDSGAKGD 839

The following BLAST results are available for this feature:

BLAST of TCONS_00023063-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00023063-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTLL5	5.505e-172	55.36	Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=T...	[more]

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TCONS_00023063-protein (polypeptide) - C. hemisphaerica