TCONS_00022949-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022949-protein
Unique NameTCONS_00022949-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length352

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022949-protein ID=TCONS_00022949-protein|Name=TCONS_00022949-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MSSLNPINVLHAGAEEERAETARLSSFVGAIAIGDLVKTTLGPKGMDKIL
YSMGQEGKGGQSIQVTNDGATILRSVGVDNPAAKVLVDISKVQDQEVGDG
TTSVAVLACELLREAEKLISQKIHPQTIIAGWRKASKTAAAALENFAKDN
SADSEKFRNDLMNIARTTLSSKILTQHREHFTELAVNAVMRLKGSGNLEA
IQIIKKLGGSLDDSFLDEGFLLDKKIGNNQPKRIENATILIGNTAMDADK
IKVFGSRVRVDSVAKVAELELAEKEKMKDKVNLILNHGVNCFINRQLIYN
YPEQLFADAGVMAIEHADFEGVERLALVTGGEIVSTFHNPEMVKIGKCKL
IX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012902XLOC_012902Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022949TCONS_00022949Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR027413GROEL-like_equatorial
IPR012716Chap_CCT_beta
IPR002423Cpn60/TCP-1
IPR002194Chaperonin_TCP-1_CS
IPR027409GroEL-like_apical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 35..51
score: 53.64
coord: 93..112
score: 50.21
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 12..252
e-value: 1.6E-54
score: 184.1
IPR012716T-complex protein 1, beta subunitTIGRFAMTIGR02341TIGR02341coord: 9..351
e-value: 1.7E-188
score: 625.4
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 34..351
e-value: 7.7E-84
score: 282.0
NoneNo IPR availableGENE3D3.30.260.10coord: 278..352
e-value: 2.0E-6
score: 27.4
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 15..148
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 157..217
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 93..101
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 38..50
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 65..81
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 213..351

Blast
[Close]
BLAST of TCONS_00022949-protein vs. Swiss-Prot (Human)
Match: TCPB (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4)

HSP 1 Score: 530.791 bits (1366), Expect = 0.000e+0
Identity = 269/349 (77.08%), Postives = 303/349 (86.82%), Query Frame = 0 
Query:    3 SLNPINVLHAGAEEERAETARLSSFVGAIAIGDLVKTTLGPKGMDKILYSMGQEGKGGQSIQVTNDGATILRSVGVDNPAAKVLVDISKVQDQEVGDGTTSVAVLACELLREAEKLISQKIHPQTIIAGWRKASKTAAAALENFAKDNSADSEKFRNDLMNIARTTLSSKILTQHREHFTELAVNAVMRLKGSGNLEAIQIIKKLGGSLDDSFLDEGFLLDKKIGNNQPKRIENATILIGNTAMDADKIKVFGSRVRVDSVAKVAELELAEKEKMKDKVNLILNHGVNCFINRQLIYNYPEQLFADAGVMAIEHADFEGVERLALVTGGEIVSTFHNPEMVKIGKCKLI 351
            SL P+N+  AGA+EERAETARL+SF+GAIAIGDLVK+TLGPKGMDKIL S G++     S+ VTNDGATIL+++GVDNPAAKVLVD+S+VQD EVGDGTTSV VLA ELLREAE LI++KIHPQTIIAGWR+A+K A  AL + A D+ +D  KFR DLMNIA TTLSSK+LT H++HFT+LAV AV+RLKGSGNLEAI IIKKLGGSL DS+LDEGFLLDKKIG NQPKRIENA ILI NT MD DKIK+FGSRVRVDS AKVAE+E AEKEKMK+KV  IL HG+NCFINRQLIYNYPEQLF  AGVMAIEHADF GVERLALVTGGEI STF +PE+VK+G CKLI
Sbjct:    5 SLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDA----SLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLI 349
The following BLAST results are available for this feature:
BLAST of TCONS_00022949-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPB0.000e+077.08T-complex protein 1 subunit beta OS=Homo sapiens G... [more]
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