TCONS_00022895-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022895-protein
Unique NameTCONS_00022895-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length614

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022895-protein ID=TCONS_00022895-protein|Name=TCONS_00022895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=614bp
MSCRRESGPNIAMKTFSNPKMRELRHPIVKPKLSFDSLTTKANHLKEKLS
QRSSYLTDGFSNHDYSPLHTKIDRKKENTLTEIPYCGSSRRRKSHPVSQS
VIDNSSVSIVEEEQPPVPEEERQRRKTVPVIYGDILNPKNRGTLLKRTLR
AYSSINLVVGTIIGSGIFLSPSPIIRDSGSIGLSLIVWAVCGLCTLLGAL
CYIELGTEIQRSGSEFAYLLNGFGKLPAFIYTWTSVLVIRPTSTATISLV
MAEYFCKAFSHDEDDQLTKRYIALVCIVIITVVNCISVRWAVIMQNVFTA
AKLVGVAIIIVIGFIEIGKGNFKNFEKPFEGSEKNVFTISKGFYSGLWAY
DGWNTLNFVTEEMHNPSRDMPRTLIISMSIVIICYLLCNVSYILVLGGDQ
IAKSSTVALDVANAYLGKASVIIPILVGLSCFGAVNGLAFSSGRLVYAAA
REGHLPKVLSMVQMKRRTPIPSLIFTAVISIIMLIPNTSQFETLVGLFSF
ASWLFYGACFVVLLYLRFSRKTMIRPYKVFLPIPVIMVAVSVFLIVFPFL
GEWIGCTIALGVILLGIPVYIIFVHVDILKYAPNVFQNCAGSCVSKSQTT
FGMEFPTDESFFKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012873XLOC_012873Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022895TCONS_00022895Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Vocabulary: Molecular Function
TermDefinition
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0003333amino acid transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0003333 amino acid transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0015171 amino acid transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002293Amino acid/polyamine transporter IPIRSFPIRSF006060AA_transportercoord: 125..587
e-value: 2.6E-76
score: 254.6
IPR002293Amino acid/polyamine transporter IPFAMPF13520AA_permease_2coord: 153..550
e-value: 2.9E-70
score: 237.1

Blast
[Close]
BLAST of TCONS_00022895-protein vs. Swiss-Prot (Human)
Match: BAT1 (b(0,+)-type amino acid transporter 1 OS=Homo sapiens GN=SLC7A9 PE=1 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 5.479e-130
Identity = 204/459 (44.44%), Postives = 299/459 (65.14%), Query Frame = 0 
Query:  122 RQRRKTVPVIYGDILNPKNRGTLLKRTLRAYSSINLVVGTIIGSGIFLSPSPIIRDSGSIGLSLIVWAVCGLCTLLGALCYIELGTEIQRSGSEFAYLLNGFGKLPAFIYTWTSVLVIRPTSTATISLVMAEYFCKAFSHD-EDDQLTKRYIALVCIVIITVVNCISVRWAVIMQNVFTAAKLVGVAIIIVIGFIEIGKGNFKNFEKPFEGSEKNVFTISKGFYSGLWAYDGWNTLNFVTEEMHNPSRDMPRTLIISMSIVIICYLLCNVSYILVLGGDQIAKSSTVALDVANAYLGKASVIIPILVGLSCFGAVNGLAFSSGRLVYAAAREGHLPKVLSMVQMKRRTPIPSLIFTAVISIIMLIPNTSQFETLVGLFSFASWLFYGACFVVLLYLRFSRKTMIRPYKVFLPIPVIMVAVSVFLIVFPFLG----EWIGCTIALGVILLGIPVYIIFVH 575
            R+RR+    I      PK   T L++ L   S I+++VGTIIGSGIF+SP  ++ ++ ++G  LI+WA CG+   LGALC+ ELGT I +SG E+ YL+  +G +PA++++W S++VI+PTS A I L  +EY C  F    +  Q+  + +A   I+ I+ VN +SVR    +QN+FTAAKLV VAIII+ G + + +GN KNF+  FEG++ +V  IS  FY+GLWAYDGWN LN++TEE+ NP R++P  +II + +V  CY+L NVSY  V+   ++ +S  VA+   +  L  AS I+P+ V  S  GA NG  F++GRL+Y A REGH+ KVLS + ++R TP P++IF  +I+ I +IP      +LV  FSFA+WLFYG   + L+ +RF+RK + RP KV + IPV+M  +SVFL++ P +     E++ C +    IL G+  Y +FVH
Sbjct:    7 RKRREDEKSIQSQ--EPKT--TSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIPG--DINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVL---FILSGLLFYFLFVH 456
The following BLAST results are available for this feature:
BLAST of TCONS_00022895-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BAT15.479e-13044.44b(0,+)-type amino acid transporter 1 OS=Homo sapie... [more]
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