TCONS_00022802-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022802-protein
Unique NameTCONS_00022802-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022802-protein ID=TCONS_00022802-protein|Name=TCONS_00022802-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MAQTSNDWKKKVEFYSEKFENAFPDIVNELVGDDEAKPELREAAARLRKS
IEYNTFGGKRFHGLTVILTVDFLRNGQLSEDEIKKGIYLGWCFEILKALF
LIADDIMDGSELRRGRPCWHKKVGLVSINETYLMEQCIYALIEKHFKEES
YLFELYKTFHRVSYLLVMGQELDMVTSEKIDGELNMDSFTEEKFQTIAKY
KTGYSFFYLPVCLGFHVAKVTDPKIFTEAETILLELGEYFQVQNDYFDCY
GDPSVTGKIGRDIEDAKCSWFITQALKKSNEEQKEILKANYGNDDVTSVA
VVKEIYEILEMEKSYFTYKEKSHNSLQNLVQSLGSHFPKELFQFFVMKVF
GRNT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012815XLOC_012815Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022802TCONS_00022802Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
IPR033749Polyprenyl_synt_CS
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domainGENE3D1.10.600.10coord: 10..354
e-value: 4.4E-71
score: 239.0
IPR008949Isoprenoid synthase domainSUPERFAMILY48576Terpenoid synthasescoord: 15..353
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 46..309
e-value: 3.6E-76
score: 255.5
NoneNo IPR availableSFLDSFLDG01017Polyprenyl_Transferase_Likecoord: 9..341
e-value: 0.0
score: 238.7
NoneNo IPR availableSFLDSFLDS00005Isoprenoid_Synthase_Type_Icoord: 48..333
e-value: 0.0
score: 181.8
NoneNo IPR availableCDDcd00685Trans_IPPS_HTcoord: 42..278
e-value: 3.31202E-55
score: 182.366
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 101..115

Blast
[Close]
BLAST of TCONS_00022802-protein vs. Swiss-Prot (Human)
Match: FPPS (Farnesyl pyrophosphate synthase OS=Homo sapiens GN=FDPS PE=1 SV=4)

HSP 1 Score: 280.411 bits (716), Expect = 1.236e-91
Identity = 136/340 (40.00%), Postives = 213/340 (62.65%), Query Frame = 0 
Query:   17 EKFENAFPDIVNELVGDDEAKPELREAAARLRKSIEYNTFGGKRFHGLTVILTV-DFLRNGQLSEDEIKKGIYLGWCFEILKALFLIADDIMDGSELRRGRPCWHKK--VGLVSINETYLMEQCIYALIEKHFKEESYLFELYKTFHRVSYLLVMGQELDMVTSEKIDGELNMDSFTEEKFQTIAKYKTGYSFFYLPVCLGFHVAKVTDPKIFTEAETILLELGEYFQVQNDYFDCYGDPSVTGKIGRDIEDAKCSWFITQALKKSNEEQKEILKANYGNDDVTSVAVVKEIYEILEMEKSYFTYKEKSHNSLQNLVQSLGSHFPKELFQFFVMKVFGRN 353
            + F   F  IV  L  D+   PE+ +A ARL++ +EYN  GGK   GLTV++   + +   +   D +++   +GWC E+L+A FL+ADDIMD S  RRG+ CW++K  VGL +IN+  L+E CIY L++ + +E+ Y   L + F + SY   +GQ LD++T+ +  G +++  FTE+++++I KYKT +  FYLP+    ++A +   K    A+ ILLE+GE+FQ+Q+DY D +GDPSVTGKIG DI+D KCSW + Q L+++  EQ +ILK NYG  +   VA VK +YE L++   +  Y+E S++ +  L++   +  P  +F     K++ R 
Sbjct:   81 QDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ--GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRR 418
The following BLAST results are available for this feature:
BLAST of TCONS_00022802-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FPPS1.236e-9140.00Farnesyl pyrophosphate synthase OS=Homo sapiens GN... [more]
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