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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00022711-protein ID=TCONS_00022711-protein|Name=TCONS_00022711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
GRCGLNKLCTNINVQPGYACSCAPGFVTSLQNSNNCVLPCANNPCLANSA
CTNNGNSFICTCNSGYKEVNNVCVDIDECTELGANGLPLHNCAAGTQVCV
NTAGSFRCDSALQQCTVGRCPGANKVCQNIQTSPGYSCSCNTNFVPSVVA
NSIDCVLPCANNPCQANSACTNNGNSFICTCNSGYKEVNNVCVDIDECTE
LGANGLPLHNCAAGTVCVNTIGSFRCDSANSCTGKQDGERFPLAGSNTQY
IECDASGNSVTKSCPNGVISSFSLTLGSRSFGNGIWFSPVFLTCVNTTNN
ANPPATVAKSNGQWDLVDACKDISNSPDASGALVKETKLPLDFGVGVDPC
QKWLLCKDGDLLKKEEVIPEAGDCSTNEQGYDRDQRICDELNNKCPIKN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000742 | EGF-like domain | SMART | SM00181 | egf_5 | coord: 107..156
e-value: 61.0
score: 7.0
coord: 158..193
e-value: 0.0048
score: 26.1
coord: 2..37
e-value: 16.0
score: 13.6
coord: 39..74
e-value: 0.009
score: 25.2 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 156..193
score: 9.76 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 37..74
score: 9.521 |
| IPR001881 | EGF-like calcium-binding domain | SMART | SM00179 | egfca_6 | coord: 3..37
e-value: 0.45
score: 4.6
coord: 152..193
e-value: 0.026
score: 14.6
coord: 40..74
e-value: 0.054
score: 12.0
coord: 194..254
e-value: 0.014
score: 16.7
coord: 75..128
e-value: 0.0022
score: 23.3 |
| IPR001881 | EGF-like calcium-binding domain | PFAM | PF07645 | EGF_CA | coord: 75..116
e-value: 2.5E-5
score: 24.3
coord: 159..192
e-value: 0.015
score: 15.4
coord: 194..232
e-value: 1.2E-6
score: 28.5 |
| None | No IPR available | GENE3D | 2.40.155.10 | | coord: 59..84
e-value: 4.8E-8
score: 32.3 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 85..105
e-value: 3.8E-4
score: 20.2 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 152..176
e-value: 1.1E-5
score: 24.7
coord: 196..227
e-value: 2.5E-8
score: 33.1 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 106..121
e-value: 0.018
score: 14.4
coord: 228..393
e-value: 5.5E-4
score: 19.2
coord: 177..195
e-value: 1.2E-7
score: 31.0 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 38..58
e-value: 4.5E-6
score: 26.1 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 1..37
e-value: 0.001
score: 18.5 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 122..151
e-value: 0.075
score: 12.9 |
| None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 39..81 |
| None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 158..200 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 60..73 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 179..192 |
| IPR018097 | EGF-like calcium-binding, conserved site | PROSITE | PS01187 | EGF_CA | coord: 194..226 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 170..181 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 51..62 |
Blast
The following BLAST results are available for this feature:
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