TCONS_00022639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022639-protein
Unique NameTCONS_00022639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022639-protein ID=TCONS_00022639-protein|Name=TCONS_00022639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MLGMEVFLKRDYMQITGSFKERGARNTLMMLSKEQKARGVIAASAGNHAM
AMAYHGKELGIPVTVCMPVNAPITKVSRCEKLKARVYKYGADIIQAKDYA
LEIAAKEGLAYINGYDHPDILAGAGACALECIDQVENIDAVVIPIGGGGL
IAGCSVAFKSLNPNIEVIGVESVRCASYKAALEAGKPVKIEVDQSMTLAD
GLCVPKIGSNAFETARSNVDKCVTVDEAYIGLAVLRLVEEEKCVVEGAGA
TGLAAALAGKLDHLKGKRVVFTLCGGNIDSTVLGRVIERGLAADGRMLRF
SVVISDRPGGLAHLTKVLADTGASVKDILHERAWLKTSIFQVENKVVCEV
RDAEHGAQLKKVLEENFDQVRFYTYHI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012713XLOC_012713Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022639TCONS_00022639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
IPR001926TrpB-like_PLP-dep
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1100coord: 1..104
e-value: 2.7E-26
score: 91.7
NoneNo IPR availableGENE3D3.30.70.260coord: 297..371
e-value: 1.1E-5
score: 25.1
NoneNo IPR availableGENE3D3.40.50.1100coord: 105..281
e-value: 1.2E-43
score: 148.4
NoneNo IPR availableCDDcd01562Thr-dehydcoord: 1..279
e-value: 2.02285E-108
score: 322.129
NoneNo IPR availableCDDcd04886ACT_ThrD-II-likecoord: 300..372
e-value: 1.73111E-20
score: 83.3614
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 299..361
IPR002912ACT domainPFAMPF01842ACTcoord: 302..366
e-value: 2.4E-6
score: 27.1
IPR002912ACT domainPROSITEPS51671ACTcoord: 299..377
score: 9.989
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymePFAMPF00291PALPcoord: 2..275
e-value: 6.6E-70
score: 235.7
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 2..284

Blast
[Close]
BLAST of TCONS_00022639-protein vs. Swiss-Prot (Human)
Match: SRR (Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.502e-37
Identity = 100/295 (33.90%), Postives = 152/295 (51.53%), Query Frame = 0 
Query:    1 MLGMEVFLKRDYMQITGSFKERGARNTLMML---SKEQKARGVIAASAGNHAMAMAYHGKELGIPVTVCMPVNAPITKVSRCEKLKARVYKYGADII--QAKDYALEIAAK------EGLAYINGYDHPDILAGAGACALECIDQVENIDAVVIPIGGGGLIAGCSVAFKSLNPNIEVIGVESVRCAS-YKAALEAGKPVKIEVDQSMTLADGLCVPKIGSNAFETARSNVDKCVTVDEAYIGLAVLRLVEEEKCVVEGAGATGLAAALAGKLDHLKG--KRVVFTLCGGNIDST 281
            + G  +F K +  Q TGSFK RGA N +  L   + E+K + V+  S+GNH  A+ Y  K  GIP  + +P  AP      C+KL   +  YGA I+  +  D + E  AK      EG+  ++    P ++AG G  ALE ++QV  +DA+V+P+GGGG++AG ++  K+L P+++V   E       Y++ L+ GK +   +    T+ADG+    IG N +   R  VD   TV E  I  A   + E  K ++E     G+AA L+     +    K +   L GGN+D T
Sbjct:   37 LTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAP-----DCKKLA--IQAYGASIVYCEPSDESRENVAKRVTEETEGI-MVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLK-GK-LMPNLYPPETIADGV-KSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSGGNVDLT 320
The following BLAST results are available for this feature:
BLAST of TCONS_00022639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRR3.502e-3733.90Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1[more]
back to top