TCONS_00022571-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022571-protein
Unique NameTCONS_00022571-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022571-protein ID=TCONS_00022571-protein|Name=TCONS_00022571-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
MRRSKRNIQQDLTIESTRDESQILDGNHRNEGENVIKSKYFKTDEEKPSC
SSPTVSQTRNTVCKTNIALKRTDFEKDGLQQAKYLLGKIINVCHEGSFMR
GRIVETEAYLGVNDKACHAYGEKRTERTEAMYMTEGTSYVYSIYGMYNCL
NISSSSYGGATLIRALEPLEGIEKMRKNREKSKKTVGKTVKPKDICNGPS
KLCQAMGITKQEFNRVDMVENNDFFVSDDGWKTEEVVVCKRIGVEGYGED
AANKPYRFYVKGNANVSVINKKAEQEMTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012658XLOC_012658Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022571TCONS_00022571Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003180PurDNA_glycsylse
IPR011034Formyl_transferase_C-like
Vocabulary: Biological Process
TermDefinition
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003905alkylbase DNA N-glycosylase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
molecular_function GO:0003905 alkylbase DNA N-glycosylase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003180Methylpurine-DNA glycosylase (MPG)PFAMPF02245Pur_DNA_glycocoord: 74..263
e-value: 5.5E-56
score: 188.6
IPR003180Methylpurine-DNA glycosylase (MPG)GENE3D3.10.300.10coord: 65..275
e-value: 3.4E-64
score: 215.4
IPR003180Methylpurine-DNA glycosylase (MPG)TIGRFAMTIGR00567TIGR00567coord: 70..267
e-value: 1.5E-57
score: 192.2
IPR003180Methylpurine-DNA glycosylase (MPG)HAMAPMF_005273MGHcoord: 71..267
score: 28.871
IPR003180Methylpurine-DNA glycosylase (MPG)CDDcd00540AAGcoord: 74..267
e-value: 1.20356E-84
score: 253.215
IPR011034Formyl transferase, C-terminal-likeSUPERFAMILY50486FMT C-terminal domain-likecoord: 68..273

Blast
[Close]
BLAST of TCONS_00022571-protein vs. Swiss-Prot (Human)
Match: 3MG (DNA-3-methyladenine glycosylase OS=Homo sapiens GN=MPG PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 1.868e-50
Identity = 88/206 (42.72%), Postives = 131/206 (63.59%), Query Frame = 0 
Query:   74 FEKDGLQQAKYLLGKI-INVCHEGSFMRGRIVETEAYLGVNDKACHAYGEKRTERTEAMYMTEGTSYVYSIYGMYNCLNISSSSYGGATLIRALEPLEGIEKMRKNREKSKK-TVGKTVKPKDICNGPSKLCQAMGITKQEFNRVDMVENNDFFVSDDGWK-TEEVVVCKRIGVEGYGEDAANKPYRFYVKGNANVSVINKKAEQE 276
            F++  +  A+  LG++ +     G+ +RGRIVETEAYLG  D+A H+ G ++T R   M+M  GT YVY IYGMY C+NISS   G   L+RALEPLEG+E MR+ R   +K T  + +K +++C+GPSKLCQA+ I K  F++ D+ ++   ++     + +E  VV       G+  + A KP RFYV+G+  VSV+++ AEQ+
Sbjct:   91 FDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVYIIYGMYFCMNISSQGDGACVLLRALEPLEGLETMRQLRSTLRKGTASRVLKDRELCSGPSKLCQALAINK-SFDQRDLAQDEAVWLERGPLEPSEPAVVAAARVGVGHAGEWARKPLRFYVRGSPWVSVVDRVAEQD 295
The following BLAST results are available for this feature:
BLAST of TCONS_00022571-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
3MG1.868e-5042.72DNA-3-methyladenine glycosylase OS=Homo sapiens GN... [more]
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