TCONS_00022566-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022566-protein
Unique Name	TCONS_00022566-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	608

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022566-protein ID=TCONS_00022566-protein|Name=TCONS_00022566-protein|organism=Clytia hemisphaerica|type=polypeptide|length=608bp
MSINTVIEYSLVVEPDKDLDRLHKECLGCISTDIQEYLWHKEEFCLNATL
DFDNSGLAALYGSTDVGENINDEWFIVHLLFKLSKKFPRCIIQVTDTDDN
FLLIEAAEYLPRWLKPETSDNRVFIYNGNLHLIPFPSNPSEVTIYPTGKP
TLQQAFKILTNDDEAKTCACPKIQECLNARIKDYPSKIQKDFHHAHCYLP
LELIYMLHKQPALVAAAVEAFYNRDHIDIKTCKSLPSFTPNKQALSRVKF
TKHLYCQLAQARFVPERRSPWQLPTTNDTTYKSKELGYKLACGFEILLSR
YQMSQKDGQPHGKQWQSFLENLKKNDFFQGEMEGSKKYKEFMSRAKEHFK
EHIKINIDSFGKDLLKLYEEVGHNEPMVKNLASKLLPEDDDSWMTVTPEE
LDQMMLGAWGRESTNQKHGKNDVENLSHLVDNMKLFVDKVSSYEGVETPQ
EVDVNQDSGRAGAPSIDDEIQFDPKAFMENISNLLSPPSQYASEKVKEGF
QFSDSDDDSIDDDFVTCKDDDVIDKNDVSDESGFYDVIGSMDDELKGTSI
PRSFQSQEGEEGLNYDVNLIRNFLESFQSQDGLAGPVSNILQSMGMSLPP
NEDGTKAT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012654	XLOC_012654	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022566	TCONS_00022566	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010770	Ecd

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010770	Ecd family	PFAM	PF07093	SGT1	coord: 16..561 e-value: 5.2E-162 score: 540.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..467

Blast

[Close]

BLAST of TCONS_00022566-protein vs. Swiss-Prot (Human)
Match: ECD (Protein ecdysoneless homolog OS=Homo sapiens GN=ECD PE=1 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 1.335e-126
Identity = 238/647 (36.79%), Postives = 352/647 (54.40%), Query Frame = 0

Query:    2 SINTVIEYSLVVEPDKDLDR-LHKECL--------GCISTDIQEYLWHKEEFCLNATLDFDNSGLAA-LYGSTDVGENINDEWFIVHLLFKLSKKFPRCIIQVTDTDDNFLLIEAAEYLPRWLKPETSDNRVFIYNGNLHLIPFPSNPSEVTIYPTGKPTLQQAFKILTNDDEAKTCACPKIQECLNARIKDYPSKIQKDFHHAHCYLPLELIYMLHKQPALVAAAVEAFYNRDHIDIKTCKSLPSFTPNKQALSRVKFTKHLYCQLAQARFVPERRSPWQLPTTNDTTYKSKELGYKLACGFEILLSR----YQMSQKDGQPHGKQWQSFLENLKKNDFFQGEMEGSKKYKEFMSRAKEHFKEHIKINIDSF----GKDLLKLYEEVGHNEPMVKNLASKLLPEDDDSWMTVTPEELDQMMLGAWGRESTN--QKHGKNDVENLSHLVDNMKLFVDKVSSYEGVETPQEVDVNQDSGRAGAPSIDDEIQFDPKAFMENISNLLSPPSQYASEKVKEGFQFS--DSDDDSIDDDFVTCKDDDVIDKNDVSDESGFYDVIGSMDDELKGTSIPRSF---------------QSQEGEEG--------LNYDVNLIRNFLESFQSQDGLAGPVSNILQSMGMSLPPNED 603
            ++   +EY L + PD+  D   HKE L           +  +  Y+W  + F  N        G+ A ++G T  G+NI DEWFIV+++ +++K+FP  + ++ D D  FLLIEAA++LP+WL PE S NRVF  +G L +IP P      +  PT  PT+ QA  I+T   E K  A   I+  +N RI+ YP KIQ   H AHC+LP  ++ +L ++P LVAAAV+AFY RD ID++ C+   +F P  + ++ V FTK LY QL Q RFVP+RRS ++LP  +D  Y++ ELG KLA GFEIL S+    +   +K        W SFLE+LKKND+F+G +EGS +Y+E +  A+ +F+  +     S     G+++L L + +  +   +K  A+ L PEDDD W+ ++P++LDQ++  A G++ +    K  K    +L+ + ++MK F+ KVS+++G E P+E            PS +  I FD  +F+     +L P    +     +   F   DSDDD    DF T +  +        D    Y  +  MD EL  T I +SF                S E + G        ++ D+NL+ N LES+ SQ GLAGP SN+LQSMG+ LP N D
Sbjct:    9 TMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF--NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIEAADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSE-KILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDPIDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHELGMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERLEMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPRE------------PS-EAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDL---DFETHEPGEEASLKGTLDNLKSY--MAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGVQLPDNTD 634

The following BLAST results are available for this feature:

BLAST of TCONS_00022566-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022566-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ECD	1.335e-126	36.79	Protein ecdysoneless homolog OS=Homo sapiens GN=EC...	[more]

You are here

TCONS_00022566-protein (polypeptide) - C. hemisphaerica