TCONS_00022497-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022497-protein
Unique Name	TCONS_00022497-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	921

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022497-protein ID=TCONS_00022497-protein|Name=TCONS_00022497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=921bp
MKTRFTTIDIKAALAEINKSDAIGLRVMNVYDIDNRTYLVRLVHGDTKIV
ILIESGNRIHLTEYDWPKNMMPSGFSMKCRKHLRGRRLAAVNQIGIDRIV
DFTFGYDEAAYHLIVELYDRGNIILTDHEYKILQLLRVRADTDKDVKFAV
REQYPVDLAKQHEGVPNEEKIQTILKEAKPGENLKRILNPNFVYGPAVLE
HTLLSVGLKPNAKVPQQLNPEDSEVINKISNALHNSENILQSIQDDPKGY
IIQRAEKKAKSDGDSDDKLLTYAEFHPYFYEQHQKSPNLEFPSFNKSVDE
FFSKLESQKIDMKAMNAEKSALKRLENVKDDHKKRLEALKSSQDLDTTKA
ELIEMNLPLVEQAIATINSAIANQIDWEEIEDIVKEAQSQHDPIASSIKS
LKLNVNQIVLSLRNFYDEDSDSDDESEDDGENKNLKKSSSPKTIEINIDL
GLSAFANARSFHNKRRQAASKEEKTIQASKKALRSAEQKTKETLKEVQTA
KMISKTRKANWFEKFYWFISSENYLVVGGRDQQQNELLVKRYLRAGDLYV
HADLHGASSVIIINHGKGDIPPKTLNEAGTMAICYSAAWDARVVTSAWWV
HHNQVSKTAPSGEYLTTGSFMIRGKKNYLPPSHLVMGFSVMFKLEESSIP
NHVNDRRVRTIEDDVASQVSEADTGTIDEEQEIPLVNEDPDEEVLSPVSE
ETIKTDMEKCDIKEEETDNIEKDSLPHVENIVEIENNEAKNVSNSENVAS
DENEDHKDRDDDIEKEDKENNEKEQIQEGEGVTNIEQEVEKSTAETKEDD
IDEDEDFEYPDTNIELQYMGGEKFQLQRGESTYSNEGSKSENTGEEAKNE
NRKPKLSKKQRRYVTPFYFEDTRFFYKNILFKNIHDETSQKFKNVLRKSP
SWNLATEAKNAIFRAFSIISC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012621	XLOC_012621	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022497	TCONS_00022497	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008532	DUF814

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 305..342
None	No IPR available	COILS	Coil	Coil	coord: 469..496
None	No IPR available	PFAM	PF05833	FbpA	coord: 7..497 e-value: 4.2E-36 score: 124.6
None	No IPR available	GENE3D	2.30.310.10		coord: 3..159 e-value: 5.8E-41 score: 139.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 735..809
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 463..489
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 827..858
IPR008532	Domain of unknown function DUF814	PFAM	PF05670	DUF814	coord: 517..615 e-value: 2.7E-24 score: 85.0

Blast

[Close]

BLAST of TCONS_00022497-protein vs. Swiss-Prot (Human)
Match: NEMF (Nuclear export mediator factor NEMF OS=Homo sapiens GN=NEMF PE=1 SV=4)

HSP 1 Score: 798.89 bits (2062), Expect = 0.000e+0
Identity = 416/838 (49.64%), Postives = 562/838 (67.06%), Query Frame = 0

Query:    1 MKTRFTTIDIKAALAEINKSDAIGLRVMNVYDIDNRTYLVRLVHGDTKIVILIESGNRIHLTEYDWPKNMMPSGFSMKCRKHLRGRRLAAVNQIGIDRIVDFTFGYDEAAYHLIVELYDRGNIILTDHEYKILQLLRVRADTDKDVKFAVREQYPVDLAKQHEGVPNEEKIQTILKEAKPGENLKRILNPNFVYGPAVLEHTLLSVGLKPNAKVPQQLNPEDSEVINKISNALHNSENILQSIQD-DPKGYIIQRAEKKAKSDGDSD-DKLLTYAEFHPYFYEQHQKSPNLEFPSFNKSVDEFFSKLESQKIDMKAMNAEKSALKRLENVKDDHKKRLEALKSSQDLDTTKAELIEMNLPLVEQAIATINSAIANQIDWEEIEDIVKEAQSQHDPIASSIKSLKLNVNQIVLSLRNFY-----------------DEDSDSDDESEDDGENKNLKKSSSPKTIEINIDLGLSAFANARSFHNKRRQAASKEEKTIQASKKALRSAEQKTKETLKEVQTAKMISKTRKANWFEKFYWFISSENYLVVGGRDQQQNELLVKRYLRAGDLYVHADLHGASSVIIINHGKGDIPPKTLNEAGTMAICYSAAWDARVVTSAWWVHHNQVSKTAPSGEYLTTGSFMIRGKKNYLPPSHLVMGFSVMFKLEESSIPNHVNDRRVRTIEDDVASQVSEADTGTIDEEQEIPLVNEDPDEEVLSPVSEETIKTDMEKCDIKEEETDNIEKDSLPHVENIVEIENNEAKNVSNSENVASDENEDHKDRDDDIEKEDKENNEKEQIQEGEGVTNIEQEVEKSTAETKEDDIDEDEDFEYPDTNIELQYM 819
            MK+RF+TID++A LAE+N S  +G+RV NVYD+DN+TYL+RL   D K  +L+ESG RIH TE++WPKNMMPS F+MKCRKHL+ RRL +  Q+G+DRIVDF FG DEAAYHLI+ELYDRGNI+LTD+EY IL +LR R D   DVKFAVRE+YP+D A+  E +   E++  I+  A  GE LKR+LNP   YGPA++EH LL  G   N KV ++L  +D   I K+  +L  +E+ +++  +   KGYIIQ+ E K   + D   + +LTY EFHP+ + QH + P +EF SF+K+VDEF+SK+E QKID+KA+  EK ALK+L+NV+ DH+ RLEAL+ +Q++D  K ELIEMNL +V++AI  + SA+ANQIDW EI  IVKEAQ+Q DP+AS+IK LKL  N + + LRN Y                   +++     +   +NK L+K    K + +++DL LSA+ANA+ +++ +R AA K +KT++A++KA +SAE+KTK+TLKEVQT   I K RK  WFEKF WFISSENYL++GGRDQQQNE++VKRYL  GD+YVHADLHGA+S +I N     IPP+TL EAGTMA+CYSAAWDARV+TSAWWV+H+QVSKTAP+GEYLTTGSFMIRGKKN+LPPS+L+MGFS +FK++ES +  H  +R+VR                            +D D E L+  + E I  +ME+ D  +  +D   +D   H E  VE+   E     + E++      D  + ++ I++E  E+       EGE      +EV K      E   + +E   YPDT I+L ++
Sbjct:    1 MKSRFSTIDLRAVLAELNAS-LLGMRVNNVYDVDNKTYLIRLQKPDFKATLLLESGIRIHTTEFEWPKNMMPSSFAMKCRKHLKSRRLVSAKQLGVDRIVDFQFGSDEAAYHLIIELYDRGNIVLTDYEYVILNILRFRTDEADDVKFAVRERYPLDHARAAEPLLTLERLTEIVASAPKGELLKRVLNPLLPYGPALIEHCLLENGFSGNVKVDEKLETKD---IEKVLVSLQKAEDYMKTTSNFSGKGYIIQKREIKPSLEADKPVEDILTYEEFHPFLFSQHSQCPYIEFESFDKAVDEFYSKIEGQKIDLKALQQEKQALKKLDNVRKDHENRLEALQQAQEIDKLKGELIEMNLQIVDRAIQVVRSALANQIDWTEIGLIVKEAQAQGDPVASAIKELKLQTNHVTMLLRNPYLLSEEEDDDVDGDVNVEKNETEPPKGKKKKQKNKQLQKPQKNKPLLVDVDLSLSAYANAKKYYDHKRYAAKKTQKTVEAAEKAFKSAEKKTKQTLKEVQTVTSIQKARKVYWFEKFLWFISSENYLIIGGRDQQQNEIIVKRYLTPGDIYVHADLHGATSCVIKNPTGEPIPPRTLTEAGTMALCYSAAWDARVITSAWWVYHHQVSKTAPTGEYLTTGSFMIRGKKNFLPPSYLMMGFSFLFKVDESCVWRHQGERKVRV---------------------------QDEDMETLASCTSELISEEMEQLDGGDTSSD---EDKEEH-ETPVEV---ELMTQVDQEDITLQSGRDELN-EELIQEESSED-------EGE-----YEEVRKDQDSVGEMKDEGEETLNYPDTTIDLSHL 787

The following BLAST results are available for this feature:

BLAST of TCONS_00022497-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NEMF	0.000e+0	49.64	Nuclear export mediator factor NEMF OS=Homo sapien...	[more]

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TCONS_00022497-protein (polypeptide) - C. hemisphaerica