TCONS_00022447-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022447-protein
Unique NameTCONS_00022447-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022447-protein ID=TCONS_00022447-protein|Name=TCONS_00022447-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MKMDISMTEEESIDILNKLCPCRENVIQKLLCYMTNEDTPATTNSLFLYG
NTGSGKSHVVKTMVDRLQICHSYINCIEHFTCRHLYHKILKDAGYPLSKT
CQSMMEFCRLLKLSDLNSNKTFYIILDKAERLRTNMESHLLPAFMRLGEL
TGLNICVIFITDIVLEKFFLSNGFILPITIHFPDYTKSEIVNIMALDAPK
SYGEEIYKRYCQTVVDVFYLACRETNELRHLVRYTLFFCKNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012594XLOC_012594Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022447TCONS_00022447Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020796ORC5
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000808origin recognition complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0000808 origin recognition complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 22..165
e-value: 6.1E-9
score: 35.1
IPR020796Origin recognition complex, subunit 5PFAMPF14630ORC5_Ccoord: 180..233
e-value: 1.3E-8
score: 34.7
IPR003593AAA+ ATPase domainPFAMPF13401AAA_22coord: 43..140
e-value: 2.3E-8
score: 34.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 19..195

Blast
[Close]
BLAST of TCONS_00022447-protein vs. Swiss-Prot (Human)
Match: ORC5 (Origin recognition complex subunit 5 OS=Homo sapiens GN=ORC5 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.478e-43
Identity = 84/222 (37.84%), Postives = 129/222 (58.11%), Query Frame = 0 
Query:   22 CRENVIQKLLCYMTNEDTPATTNSLFLYGNTGSGKSHVVKTMVDRLQICHSYINCIEHFTCRHLYHKIL--------KDAGYPLSKTCQSMMEFCRLLKLSDLNSN---KTFYIILDKAERLRTNMESHLLPAFMRLGELTGLNICVIFITDIVLEKFFLSNGFILPITIHFPDYTKSEIVNIMALDAPKSYGEEIYKRYCQTVVDVFYLACRETNELRHLV 232
            CRE+ +  +L  +  E    +  S+F+YG+T SGK++V +T++  L++ H ++NC+E FT R L  +IL         + G     TC++  +F RL K      N   +T YI+LDKAE LR +ME++LLP F+RL EL   N+ V+F+++IV EKF  + G   P  ++FPDY+   +  I++ D P  Y  + Y  Y   ++ VFY  CR+  ELRHL 
Sbjct:   10 CRESQVS-ILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVLDKAEYLR-DMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFPDYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLA 229
The following BLAST results are available for this feature:
BLAST of TCONS_00022447-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ORC51.478e-4337.84Origin recognition complex subunit 5 OS=Homo sapie... [more]
back to top