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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00022423-protein ID=TCONS_00022423-protein|Name=TCONS_00022423-protein|organism=Clytia hemisphaerica|type=polypeptide|length=679bp
MEFSLWMFVIQRMVKACSVVNCSNRYISKKIAESGVKKKYKAYKNIPFHS
LPVEEDRRVKWIAFINRKPGTLPKKVYVCGDHFELGKKSNDKTHTDYIPT
IAAKTKEKKSFESTTQSSSSSTSPRVSKAKLKTPSRSPSKLHSASSSLKR
TMRHKKILMARLNNPTPRSKPKLEDTLPVIDNDDNENQDNDTAALKEKIK
NLEEIILNKDKELSSSXSFESTTQSSSSSTSPRVSKAKLKTPSRSPSKLH
SASSSLKRTMRHKKILMARLNNPTPRSKPKLEDTLPVIDNDDNENQDNDT
AALKEKIKNLEEIILNKDKELSSSKRKINLLKHSNRHLKNRVEKLIKYNN
ITNLKLIETRKTIREHVFLVNNDTDKMKFYTDLPSFEIFDEIFNFVKDHV
DRDENSIKLTHKQEFIIVLMRLRLGLLEQDLAYRFGVSQPTISRIINRWI
GVMATRLEFLIHWPEREQLRKTMPGCFLDNFEKCAVILDCFEIFIEKPTD
LTARAQTWSQYKHHNTVKVLLGMTPQGTISFISQPWGGRASDVHVTENSG
LLKNLVPGDVVMADRGFTISDSVGLHCATLKIPEFTKGKSQLEKVSLDET
RDLASVRIHVERIIGLLRNKYTLLQKIAPIKMLMLKADGTCILSEILIVC
SALSNLNGPVVPXSTVFFVFDFRKWNATF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 185..212 |
| None | No IPR available | COILS | Coil | Coil | coord: 293..327 |
| None | No IPR available | GENE3D | 1.10.10.60 | | coord: 407..450
e-value: 8.5E-5
score: 21.6 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 13..102 |
| IPR006612 | Zinc finger, C2CH-type | SMART | SM00980 | THAP_2 | coord: 15..108
e-value: 4.6E-6
score: 36.2 |
| IPR006612 | Zinc finger, C2CH-type | PFAM | PF05485 | THAP | coord: 17..101
e-value: 1.8E-10
score: 41.5 |
| IPR006612 | Zinc finger, C2CH-type | PROSITE | PS50950 | ZF_THAP | coord: 13..102
score: 13.532 |
| IPR027806 | Harbinger transposase-derived nuclease domain | PFAM | PF13359 | DDE_Tnp_4 | coord: 488..655
e-value: 1.5E-46
score: 157.9 |
| IPR027805 | Transposase, Helix-turn-helix domain | PFAM | PF13613 | HTH_Tnp_4 | coord: 408..458
e-value: 7.0E-19
score: 67.2 |
Blast
The following BLAST results are available for this feature:
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