TCONS_00022417-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022417-protein
Unique NameTCONS_00022417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length549

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022417-protein ID=TCONS_00022417-protein|Name=TCONS_00022417-protein|organism=Clytia hemisphaerica|type=polypeptide|length=549bp
MSTLRLFRPTIMLHSQLWLRTSVTINQRCWISISKQCLKKHKQQKKTPPS
VAHLKREAPFVFSVVKKFQGKNIMQIDEEPMLFQPLSRDINQDDLIDDRS
QLLNDLKIKPTHKKETAFIIQPNFKWGKGRFITKLSDSRLSEAKALVESI
QSWGVHDSCIESVHENNPKLFFGSGKIIELSKRIRTMINENNVTMVFLNT
GKLSQRQIKELEAAWGCKVFDRYRVVLELFKERASTREAKLQVQLAEVQY
LRTHLSSSDFDYDQQRGGGKGMMGSGQTYMEKARRQLTEAETKIKKALGH
IKQQRNQTKTERARKSIPQIALVGYTNAGKTTLAKLLSKDAKMQPEDRLF
ATLDTTAHQGKLPSGMNALFIDTVGFISDLPHELVESFATTLEDVKTSDL
IIHVSDCSHPEFELQKNTVEDVLKKLKLSEHLQDNMIHVLNKADLRTAEQ
ESSTLETDDHHLLLSATSGEGAPQLLDAIQHGLLKSTGRGQYQINIDQSG
EELSFLYRHGTVVSATGLDDGTLDVVTILDQPNRGRFEKHFHVKLKNAN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012574XLOC_012574Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022417TCONS_00022417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016496GTPase_HflX
IPR025121GTPase_HflX_N
IPR006073GTP_binding_domain
IPR032305GTP-bd_M
IPR030394G_HFLX_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 280..307
NoneNo IPR availableGENE3D3.40.50.300coord: 87..380
e-value: 2.7E-13
score: 49.2
NoneNo IPR availableGENE3D1.20.120.430coord: 382..536
e-value: 9.8E-13
score: 48.1
IPR016496GTPase HflXTIGRFAMTIGR03156TIGR03156coord: 137..481
e-value: 5.8E-95
score: 316.1
IPR025121GTPase HflX, N-terminalPFAMPF13167GTP-bdg_Ncoord: 138..230
e-value: 5.5E-14
score: 52.5
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 319..442
e-value: 7.7E-15
score: 54.9
IPR032305GTP-binding protein, middle domainPFAMPF16360GTP-bdg_Mcoord: 233..312
e-value: 1.2E-18
score: 67.4
IPR030394HflX-type guanine nucleotide-binding (G) domainPROSITEPS51705G_HFLXcoord: 318..487
score: 45.678
IPR030394HflX-type guanine nucleotide-binding (G) domainCDDcd01878HflXcoord: 281..479
e-value: 4.19543E-70
score: 225.031
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 318..488

Blast
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BLAST of TCONS_00022417-protein vs. Swiss-Prot (Human)
Match: GTPB6 (Putative GTP-binding protein 6 OS=Homo sapiens GN=GTPBP6 PE=2 SV=3)

HSP 1 Score: 330.487 bits (846), Expect = 3.559e-107
Identity = 179/424 (42.22%), Postives = 262/424 (61.79%), Query Frame = 0 
Query:  119 IIQPNFKWGKGRFITKLSDSRLSEAKALVESIQSWGVHDSCIESVHENNPKLFFGSGKIIELSKRIRTMINENNVTMVFLNTGKLSQRQIKELEAAWGCKVFDRYRVVLELFKERASTREAKLQVQLAEVQYLRTHLSSSDFDYDQQRGGGKGMMGSGQTYMEKARRQLTEAETKIKKALGHIKQQRNQTKTERARKSIPQIALVGYTNAGKTTLAKLLSKDAKMQPEDRLFATLDTTAHQGKLPSGMNALFIDTVGFISDLPHELVESFATTLEDVKTSDLIIHVSDCSHPEFELQKNTVEDVLKKLKLSEHLQDNMIHVLNKADLRTAEQESSTLETDDHHLLLSATSGEGAPQLLDAIQHGLLKSTGRGQYQINIDQSGEELSFLYRHGTVVSATGL-DDGTLDVVTILDQPNRGRFEKHF 541
            ++ P+ KWG G+     ++ +++EA ALV ++  W V  + + S    + KL FG G    L+++IR      +VT VFLN  +++    KELEAAWG +VFDR+ VVL +F+  A T+EA+LQV LAE+   R++L   D  +  +  G + +MGSG+++M+  +R L E E KI+KAL  ++++R+  + +R R+  P I++VGYTN GKTTL K L+ DA +QP D+LFATLD TAH G LPS M  L++DT+GF+S LPH L+ESF+ TLEDV  SDLI+HV D SHPE ELQK +V   L+ L+L   L D+M+ V NK DL           T+ + + +SA  G G  +L   +   +LK+TGR    + +  +G +LS+LY+  TV     + +DG  DV  I+     G+F K F
Sbjct:  100 LVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIR---GSPDVTCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKR-DVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYS-----PTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLF 514
The following BLAST results are available for this feature:
BLAST of TCONS_00022417-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTPB63.559e-10742.22Putative GTP-binding protein 6 OS=Homo sapiens GN=... [more]
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