TCONS_00022397-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022397-protein
Unique NameTCONS_00022397-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length609

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022397-protein ID=TCONS_00022397-protein|Name=TCONS_00022397-protein|organism=Clytia hemisphaerica|type=polypeptide|length=609bp
MKILLFLFALYVQSIYCDNDEKPSYQKPSVGDTAYLSEAFHNQEEFKSRW
IMSEAKKDGVEDSIAKYDGVWKIAEPKENPLKGDHGLVLSSQAKHAAVSA
SLDKPFKFEDKALIVQYEVRFQNKHECGGAYIKLVADSPSLNLAEFTDKT
EYSIMFGPDRCGNDNKLHFIFQHENPITHKMEEKHAKKPSKDFGNIFEDG
KTHLVTLVVEPDNTYKILLDRKELSSGSLLADMEPPVNPPKMIDDPEDSK
PENWDEREKIKDPVAVKPDDWDEDAPMMIEDPNAQKPSGWLDDESELVPD
PNAVRPADWDDEEDGEWEAPQIDNPKCKAVGCGEWKRPSIKNANYKGKWS
APLIANPDYKGIWAPRKIENPNFFEDTNPFAMKSISAVGFELWSMQSDIL
FDNLIIADDQSIVDQWTVQSWEMKRKQEKSSDSSMTGMWENFMEATEEKP
WLWIVAIACIFVPIVLLVYFCTSSSKSEEVSRRKKTDEPTPDDAPVEEEH
ESQTEGEEGAASTEESDDKAATEDEGEVEVEAPKTDGEAETVEPKVEEVA
EDSPKTDKEKDSQVLEDKEEDSQEEGDEKTEEAASNTADEAGEASPSPRT
RSKRRARKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012558XLOC_012558Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022397TCONS_00022397Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001580Calret/calnex
IPR018124Calret/calnex_CS
IPR013320ConA-like_dom
IPR009033Calreticulin/calnexin_P_dom
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005509calcium ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001580Calreticulin/calnexinPRINTSPR00626CALRETICULINcoord: 340..359
score: 60.7
coord: 150..166
score: 65.39
coord: 250..263
score: 70.1
coord: 298..320
score: 66.03
coord: 387..407
score: 51.38
coord: 122..140
score: 41.49
IPR001580Calreticulin/calnexinPFAMPF00262Calreticulincoord: 37..406
e-value: 1.8E-159
score: 530.4
NoneNo IPR availableGENE3D2.60.120.200coord: 25..421
e-value: 1.5E-140
score: 467.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..609
IPR018124Calreticulin/calnexin, conserved sitePROSITEPS00804CALRETICULIN_2coord: 154..162
IPR018124Calreticulin/calnexin, conserved sitePROSITEPS00803CALRETICULIN_1coord: 120..135
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 33..247
IPR009033Calreticulin/calnexin, P domainSUPERFAMILY63887P-domain of calnexin/calreticulincoord: 236..375

Blast
[Close]
BLAST of TCONS_00022397-protein vs. Swiss-Prot (Human)
Match: CALX (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2)

HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0
Identity = 267/472 (56.57%), Postives = 332/472 (70.34%), Query Frame = 0 
Query:   22 KPSYQKPSVGDTAYLSEAFHNQEEFKSRWIMSEAKKDGVEDSIAKYDGVWKIAEPKENPLKGDHGLVLSSQAKHAAVSASLDKPFKFEDKALIVQYEVRFQNKHECGGAYIKLVADSPSLNLAEFTDKTEYSIMFGPDRCGNDNKLHFIFQHENPITHKMEEKHAKKPSKDFGNIFEDGKTHLVTLVVEPDNTYKILLDRKELSSGSLLADMEPPVNPPKMIDDPEDSKPENWDEREKIKDPVAVKPDDWDEDAPMMIEDPNAQKPSGWLDDESELVPDPNAVRPADWDDEEDGEWEAPQIDNPKCK-AVGCGEWKRPSIKNANYKGKWSAPLIANPDYKGIWAPRKIENPNFFEDTNPFAMKSISAVGFELWSMQSDILFDNLIIADDQSIVDQWTVQSWEMKRKQEKSSDSSMTGMWENFMEATEEKPWLWIVAIACIFVPIVLLVYFCTSSSKSEEVSRRKKTDEPTPD 492
            K +Y+ P      Y +++F       S WI+S+AKKD  +D IAKYDG W++ E KE+ L GD GLVL S+AKH A+SA L+KPF F+ K LIVQYEV FQN  ECGGAY+KL++ +P LNL +F DKT Y+IMFGPD+CG D KLHFIF+H+NP T   EEKHAK+P  D    F D KTHL TL++ PDN+++IL+D+  ++SG+LL DM PPVNP + I+DPED KPE+WDER KI DP AVKPDDWDEDAP  I D  A KP GWLDDE E VPDP+A +P DWD++ DGEWEAPQI NP+C+ A GCG W+RP I N NYKGKW  P+I NP Y+GIW PRKI NP+FFED  PF M   SA+G ELWSM SDI FDN II  D+ IVD W    W +K+  + +++  + G     +EA EE+PWLW+V I  + +P+ L++ FC S  K       KKTD P PD
Sbjct:   57 KVTYKAPVPTGEVYFADSFDRGT--LSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRRIVDDWANDGWGLKKAADGAAEPGVVG---QMIEAAEERPWLWVVYILTVALPVFLVILFCCSGKKQTSGMEYKKTDAPQPD 523
The following BLAST results are available for this feature:
BLAST of TCONS_00022397-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALX0.000e+056.57Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2[more]
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