TCONS_00022369-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022369-protein
Unique Name	TCONS_00022369-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	665

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022369-protein ID=TCONS_00022369-protein|Name=TCONS_00022369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=665bp
SKAHKNQMESFCEQTIQILCRFVEDAVIFIDDASCECLHWSGGFKKLLEA
GALDVRDIKHTKECLESEAKAVFVVSTPLLGQVSKYVKRIVKSSDFSQCI
VISTISSEANDFIGRGQNFPAFEYYTRQLKLWIQNELASVQIVHLPLFAC
NLTPNVFITSPNSNLFPVLSSDVARLQGFLHSKGDKRMFNNLGDVDFNFL
PHNIQCNIKMLTSSMTTMFEAMQINEDCYSVGHFSRLVANDLANMPDPKG
RRKAATKRASVVFMDRTLDLVAPISHTSDSVFGTIYEILPRLKNHNNDVA
VDMSSLFAPGNITNETLFPGSLAHYGDEEVQKLFTYFIRKTRKECLSYIC
ERVEAFLKKESITIVEPDESSKYNINRLKTLLELIRNNQSILKKYRGFLQ
CSMALLNALSDEENEHLDELLSAEKGILLEMGEENTSPFTQVMNMLTNSS
KQRFSVVDALMFCLFIYSAENEVSNLSPGDEETIKEVMINLLMDGSHKED
LLFLLGDLDSSERQIRTRIADVFERLRVISQARREMKKLTNVIGRDSMGV
VRYEALVKQIIEQIFDGTKSELEDVEFRSHGIKDFLKTGFGFFMNVTKPR
PDDHPLLILYVIGGITWHEVKTIQETLEKTKPNTQVLIGSTRIITPSEIL
EQVLCTENLFVDVDT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012550	XLOC_012550	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022369	TCONS_00022369	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001619	Sec1-like

Vocabulary: **Biological Process**
Term	Definition
GO:0006904	vesicle docking involved in exocytosis
GO:0016192	vesicle-mediated transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006904	vesicle docking involved in exocytosis
biological_process	GO:0016192	vesicle-mediated transport

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001619	Sec1-like protein	PFAM	PF00995	Sec1	coord: 85..652 e-value: 8.1E-23 score: 81.4
IPR001619	Sec1-like protein	SUPERFAMILY	56815	Sec1/munc18-like (SM) proteins	coord: 154..654
None	No IPR available	GENE3D	3.40.50.1910		coord: 228..654 e-value: 5.1E-26 score: 91.5

Blast

[Close]

BLAST of TCONS_00022369-protein vs. Swiss-Prot (Human)
Match: SCFD2 (Sec1 family domain-containing protein 2 OS=Homo sapiens GN=SCFD2 PE=1 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 3.961e-101
Identity = 217/684 (31.73%), Postives = 355/684 (51.90%), Query Frame = 0

Query:   10 SFCEQTIQILCRFVEDAVIFIDDASCECLHWSGGFKKLLEA-GALDVRDIKHTKECLESEAK---AVFVVSTPLLGQVSKYVKRIVKSSDFSQCIVISTISSE----ANDFIG------RGQNFPAFEYYTRQLKLWIQNELASVQIVHLPLFACNLTPNVFITSPNSNLFPVLSSDVARLQGFLHSKGDKRMFNNLGDVDFNFLPHNIQCNIKMLTSSMTTMFEAMQINEDCYSVGHFSRLVANDLANMPDPKGRRKAATKRASVVFMDRTLDLVAPISHTSDSVFGTIYEILPRLKNHNNDVAVDMSSLFAPGNITNE----TLFPGSLAHYGDEEVQKLFTYFIRKTRKECLSYICERVEAFLKKESITIVEPDESSKYNINRLKTLLELIRNNQSILKKYRGFLQCSMALLNALSDEENEHLDELLSAEKGILLEMGEENTSP-FTQVMNML---TNSSKQRFSVVDALMFCLFIYSAENEVS---NLSPGDEETIKEVMINLLMDGSHKEDLLFLLGDLDSSERQI--RTRIA--DVFERLRVISQARREMKKLTNV-IGRDSMGVVRYEALVKQIIEQIFDGTKSELEDVEFRSHGIKDFLKTGFGFFMNVTKPRPDDHPLLILYVIGGITWHEVKTIQETLEKTKPNTQVLIGSTRIITPSEILEQVLCTENLFVDV 663
            SF +Q  + +   V+ AV+++D A  E LHW  G  +LLEA G  D    +   + +   AK   AVFV+S  L G+  + ++ I+  S F  C+V++T+S      AN           GQ  P FE    +L  W+ N   + ++ H+PL    + P+  +T   ++LFP+L  DV  L     ++ DKR   +LGDVD   L   +   I+ L S ++++ E + + E+C++VG  S+++A DLAN    K R+K A  RASVVF+DRTLDL   + H  D++   I   LP+L  H NDV V+M +L A    T E     + PG L+   D   + L+   +    KE +  +   +     +E++ I       +    +L + ++L +NN   L  + G LQ  +A    L   +    D  L+ E+ +L  +GE   S    Q++ M+   T  + + +S  + L+  ++IYS   E++   +L    EE +K+ +  +  + S    LL  + D DSS      +++IA  ++F  LR I+ AR  +K+  +V +  +      Y+ L+KQ++E+IF   + +  D+E  S G+ D LKTGF  FM V++P P D+PLLIL+V+GG+T  EVK +++ +   KP TQV++ STR++ P  I E +  T+ L  D+
Sbjct:    8 SFTQQGWEQVLAKVKRAVVYLDAACAESLHWGCGSTRLLEAVGGPDCHLREFEPDAIGGGAKQPKAVFVLSCLLKGRTVEILRDIICRSHFQYCVVVTTVSHAVHLTANHVPAAAAAEMEGQQ-PVFEQLEEKLCEWMGNMNYTAEVFHVPLLLAPVAPHFALTPAFASLFPLLPQDVHLLNS---ARPDKRKLGSLGDVDSTTLTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSQVIAADLANYAPAKNRKKTAAGRASVVFVDRTLDLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVNMIALTALH--TEEENYNVVAPGCLSQSSDTTAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKM--SMGRVTPGQLMSYIQLFKNNLKALMNHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSVVLNQLLPMIKPVTQRTNEDYSPEELLILLIYIYSVTGELTVDKDLCEA-EEKVKKALAQVFCEESGLSPLLQKITDWDSSINLTFHKSKIAVDELFTSLRDIAGARSLLKQFKSVYVPGNHTHQASYKPLLKQVVEEIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYPLLILFVVGGVTVSEVKMVKDLVASLKPGTQVIVLSTRLLKPLNIPELLFATDRLHPDL 682

The following BLAST results are available for this feature:

BLAST of TCONS_00022369-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022369-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SCFD2	3.961e-101	31.73	Sec1 family domain-containing protein 2 OS=Homo sa...	[more]

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TCONS_00022369-protein (polypeptide) - C. hemisphaerica