TCONS_00022345-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022345-protein
Unique NameTCONS_00022345-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length753

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022345-protein ID=TCONS_00022345-protein|Name=TCONS_00022345-protein|organism=Clytia hemisphaerica|type=polypeptide|length=753bp
LRYSIPPEHGKRLETLAKGFFSGSAQDCSEFMRHKMTLISPQILRKFSIP
VNKIVHNEGEFMVTFPYGYHAGFNLGFNIAESTNFASERWIEFGKKAKHC
QCNRDSVKINMDVFIKKFQPEQWKRIQQKRIEEKQANKKKHNNLSSSSSD
SSSQEEDSEEEDDEEDDDVSSDEEEKEEEIIDTETEEEIPLSSSEEYSEN
LARVAKKQYRKPDSETRTRPKSAVKKHKQIKQKRTSKRQRIKKRLHGDSS
EDEKEIKKENKHNGTDSKKPLKINLSSAQRAMNLKSIWKFEDEKKNAEIT
YNRTLSETETKCAICVFFSQRDAEYLHGEQAEESNKRHTLTELKCGKLLV
TELCFAANNSEEDTIETAFNLMFGADGEQQDVKLLFCAKCHVAVHSVCYG
VDMTNNNNNNNNRYTKWYCQKCQHLQQQNAVQQNFFKKEETESGIDEIVD
VTSQACSVEELETDITCCLCMMRGGALKRTTCENWCHVVCAIALPEVFFE
DKQRRDGINITKLNPARQKLHCIYCSHLKKPSSSITSSCVQCQCGKCATP
FHVTCSLHNGIPLYLGDWPLLIETLCSKHSKRAKNNVEKTNKRELQSITM
GDLVYAKHKNGRYYQGRVITVSTVLYYKVIFADKSFCFDLPPEDIQNVDA
KNQVQADGTSVDVLWTDSLSYPAEVTGHWYDTVSQVRFEDASILNVKRAD
LFIDGEDIPKRVKSKISYATETQNKSYFPESLRHGTNRPRVGVRKCQSVH
KKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012530XLOC_012530Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022345TCONS_00022345Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
IPR003347JmjC_dom
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR034732EPHD
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..144
NoneNo IPR availablePFAMPF13831PHD_2coord: 384..422
e-value: 7.8E-8
score: 31.6
NoneNo IPR availableGENE3D2.30.30.140coord: 655..713
e-value: 1.8E-6
score: 27.0
coord: 598..654
e-value: 8.6E-9
score: 34.5
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 466..579
e-value: 5.5E-23
score: 81.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..272
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 597..652
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 4..108
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 658..708
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 596..653
e-value: 0.0058
score: 25.8
coord: 656..709
e-value: 70.0
score: 0.8
IPR003347JmjC domainSMARTSM00558cupin_9coord: 3..102
e-value: 0.001
score: 11.5
IPR003347JmjC domainPFAMPF02373JmjCcoord: 3..85
e-value: 3.7E-21
score: 75.6
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 1..102
score: 16.285
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 379..423
e-value: 0.055
score: 22.6
coord: 521..580
e-value: 7.6
score: 7.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 286..442
e-value: 1.3E-11
score: 43.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 458..529
e-value: 0.045
score: 13.0
coord: 530..597
e-value: 0.016
score: 14.4
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 464..580
score: 14.939
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 382..426

Blast
[Close]
BLAST of TCONS_00022345-protein vs. Swiss-Prot (Human)
Match: KDM4A (Lysine-specific demethylase 4A OS=Homo sapiens GN=KDM4A PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 6.568e-63
Identity = 147/448 (32.81%), Postives = 209/448 (46.65%), Query Frame = 0 
Query:  284 LKSIWKFEDEKKNAEITYNRTLSETETKCAICVFFSQRDAEYLHGEQAEESNKRHTLTELKCGKLLVTELCFAANNSEEDTIETAFNLMFGADGEQQDVKLLFCAKCHVAVHSVCYGVDMTNNNNNNNNRYTKWYCQKCQHLQQQNAVQQNFFKKEETESGIDEIVDVTSQACSVEELETDITCCLCMMRGGALKRTTCENWCHVVCAIALPEVFFEDKQRRDGINITKLNPARQKLHCIYCSHLKKPSSSITSSCVQCQCGKCATPFHVTCSLHNGIPLYLGDWPLLIETLCSKHSKRAKNNVEKTNKRELQSITMGDLVYAKHKNGRYYQGRVITVSTVLYYKVIFADKSFCFDLPPEDIQNVDA-KNQVQADGTSVDVLWTDSLSYPAEVTGHWYDTVSQVRFEDASILNVKRADLFIDGEDIPKRVKSKISYATETQNKSYFPE 730
            L  +W+       AE  +N T+++    CA+C+ F         G      N      + +  K L+ E+CF +     D      NL      E     L+ C KC V VH+ CYGV     + +       W C +C                                  S   LE D  CCLC +RGGAL+R   + W HV CA+A+ E  F +   R  ++++K+   R KL CI+C   KK        CVQC  G+C T FHV+C+   G+ +   DWP ++   C +H      N+E+  K  LQSIT G  V +KHKNGR+YQ  V+ ++T  +Y+V F D SF  +L PEDI + D  +    A+G  V V WTD   Y A+        + QV FED S L VKR D++   E++PKRVKS++S A++ +    F E
Sbjct:  640 LSQLWQNRPPNFEAEKEFNETMAQQAPHCAVCMIFQTYHQVEFGGFNQNCGNASDLAPQKQRTKPLIPEMCFTSTGCSTD-----INLSTPYLEEDGTSILVSCKKCSVRVHASCYGVPPAKASED-------WMCSRC----------------------------------SANALEED--CCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCIFC---KKRRKRTAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHK---IPNLERA-KGALQSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQFGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTE 1032

HSP 2 Score: 201.06 bits (510), Expect = 7.307e-54
Identity = 85/122 (69.67%), Postives = 102/122 (83.61%), Query Frame = 0 
Query:    3 YSIPPEHGKRLETLAKGFFSGSAQDCSEFMRHKMTLISPQILRKFSIPVNKIVHNEGEFMVTFPYGYHAGFNLGFNIAESTNFASERWIEFGKKAKHCQCNRDSVKINMDVFIKKFQPEQWK 124
            YS+PPEHGKRLE LAKGFF GSAQ C  F+RHKMTLISP +L+K+ IP +K+    GEFM+TFPYGYHAGFN GFN AESTNFA+ RWIE+GK+A  C C +D VKI+MDVF++KFQPE++K
Sbjct:  209 YSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYK 330
The following BLAST results are available for this feature:
BLAST of TCONS_00022345-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDM4A6.568e-6332.81Lysine-specific demethylase 4A OS=Homo sapiens GN=... [more]
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