TCONS_00022271-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022271-protein
Unique NameTCONS_00022271-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length539

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022271-protein ID=TCONS_00022271-protein|Name=TCONS_00022271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=539bp
MLRQALRRVSRDARKSSLLRQSVEKTQQRLLPACIANCQRFVSTDVTNKQ
AAAAAKDAATQTSTPAAAAAVGHIVAVIGAVVDVQFDNDLPPILNALEVH
GRDSRLILEVAQHLGENVVRTIAMDGTEGLVRGQNVVDTGDPISVPVGPE
TLGRIMNVIGEAIDERGPIETKIKSPIHTEAPEFIEMNVNQEILETGIKV
VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAVAHGGYSIFAGVGER
TREGNDLYHEFMETGVINLKDNSSKVALVYGQMNEPPGARARVALTGLTI
AEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM
GTMQERITTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDANTVLSRGI
AELGIYPAVDPLDSNSRILDPNIVGQEHYDVARSVQKILQDHKSLQDIIA
ILGMDELSEEDKNTVARARKIQRFLSQPFQVAEIFTGHIGKLVSLQDSIS
GFKKILEGELDHLPEVAFYMVGDINDVVEKANRLAEETS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012488XLOC_012488Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022271TCONS_00022271Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR024034ATPase_F1/V1_b/a_C
IPR005722ATP_synth_F1_bsu
IPR004100ATPase_F1/V1/A1_a/bsu_N
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR020003ATPase_a/bsu_AS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO:0015992proton transport
GO:0046034ATP metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046034 ATP metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0015992 proton transport
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 209..479
e-value: 1.4E-5
score: 34.6
NoneNo IPR availableGENE3D3.40.50.300coord: 143..421
e-value: 3.8E-92
score: 308.0
NoneNo IPR availableGENE3D2.40.10.170coord: 62..142
e-value: 4.6E-33
score: 112.6
NoneNo IPR availablePIRSFPIRSF039072ATPase_subunit_betacoord: 1..539
e-value: 1.5E-286
score: 949.2
NoneNo IPR availableCDDcd01133F1-ATPase_betacoord: 142..421
e-value: 0.0
score: 597.288
NoneNo IPR availableSUPERFAMILY47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 419..534
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalGENE3D1.10.1140.10coord: 422..532
e-value: 6.8E-42
score: 141.4
IPR005722ATP synthase, F1 complex, beta subunitTIGRFAMTIGR01039TIGR01039coord: 71..534
e-value: 6.2E-249
score: 824.3
IPR005722ATP synthase, F1 complex, beta subunitHAMAPMF_01347ATP_synth_beta_bactcoord: 69..534
score: 56.604
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 74..140
e-value: 1.0E-22
score: 80.3
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainSUPERFAMILY50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 69..142
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 197..416
e-value: 8.8E-64
score: 215.0
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 407..416
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 144..421

Blast
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BLAST of TCONS_00022271-protein vs. Swiss-Prot (Human)
Match: ATPB (ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B PE=1 SV=3)

HSP 1 Score: 843.573 bits (2178), Expect = 0.000e+0
Identity = 420/514 (81.71%), Postives = 455/514 (88.52%), Query Frame = 0 
Query:   28 QRLLP-ACIANCQRFVSTDVTNKQAAAAAKDAATQTS-TPAAAAAVGHIVAVIGAVVDVQFDNDLPPILNALEVHGRDSRLILEVAQHLGENVVRTIAMDGTEGLVRGQNVVDTGDPISVPVGPETLGRIMNVIGEAIDERGPIETKIKSPIHTEAPEFIEMNVNQEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAVAHGGYSIFAGVGERTREGNDLYHEFMETGVINLKDNSSKVALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSNSRILDPNIVGQEHYDVARSVQKILQDHKSLQDIIAILGMDELSEEDKNTVARARKIQRFLSQPFQVAEIFTGHIGKLVSLQDSISGFKKILEGELDHLPEVAFYMVGDINDVVEKANRLAEETS 539
            +RL P A +   Q  +    T   A    +D A QTS +P A AA G IVAVIGAVVDVQFD  LPPILNALEV GR++RL+LEVAQHLGE+ VRTIAMDGTEGLVRGQ V+D+G PI +PVGPETLGRIMNVIGE IDERGPI+TK  +PIH EAPEF+EM+V QEIL TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVA AHGGYS+FAGVGERTREGNDLYHE +E+GVINLKD +SKVALVYGQMNEPPGARARVALTGLT+AEYFRD EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT+KGSITSVQAIYVPADDLTDPAPATTFAHLDA TVLSR IAELGIYPAVDPLDS SRI+DPNIVG EHYDVAR VQKILQD+KSLQDIIAILGMDELSEEDK TV+RARKIQRFLSQPFQVAE+FTGH+GKLV L+++I GF++IL GE DHLPE AFYMVG I + V KA++LAEE S
Sbjct:   18 RRLTPSASLPPAQLLLRAAPT---AVHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS 528
The following BLAST results are available for this feature:
BLAST of TCONS_00022271-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATPB0.000e+081.71ATP synthase subunit beta, mitochondrial OS=Homo s... [more]
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