TCONS_00022187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022187-protein
Unique NameTCONS_00022187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length543

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022187-protein ID=TCONS_00022187-protein|Name=TCONS_00022187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MALSIPKSVMQNMMKDGAKSFRGLEEAVYRNIEACRQLTKILRSSYGPNG
MNKMVINHLDKLFVTSDAATMLHELEVQHPAAKMLLFASQMQEQECGDGT
NWVLIFSGALLNSAEELLRMGLSPAEVIEGYDMACKKALEILPDLVKYTV
KDLRDKSEIIKAMKPVITSKQYGNEDFLSELITRACLSVYPQTGNFNVDN
VRVQKILGSGLYSSEIVNGMVFRRHVEGDITKVANAKICVLSCPLDSMAT
ETKGTVLIKNADELVNFSKGEEDLLESQIKSIADTGCNVIVTGGKAADMA
VHFCNKYKIMVVRLMSKFELRRLCRATQATALPRITAPTPEEAGQCDSVA
LAEIGDTPVVVFRQDREDNAVATIVIRGATTNIMDDIERAVDDGVNCFKA
LTRDSRMLPGAGAVEMELAQRISTYGQTIPGLEQYAVKKFAEAFEIFPRT
MAENAGVKATELISTLYAAHTSGEGNIGFDIEGEGIATCDVLERGILDSF
LVKYWGLKFASNAASTVLRVDQIIMAKQAGGPKPKQNPNWDED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012447XLOC_012447Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022187TCONS_00022187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR027413GROEL-like_equatorial
IPR012721Chap_CCT_theta
IPR027409GroEL-like_apical_dom
IPR002423Cpn60/TCP-1
IPR002194Chaperonin_TCP-1_CS
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 373..395
score: 27.88
coord: 40..56
score: 30.19
coord: 407..419
score: 34.02
coord: 62..80
score: 31.14
coord: 92..111
score: 33.81
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 17..228
e-value: 6.1E-46
score: 156.0
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 355..521
e-value: 1.3E-36
score: 125.6
IPR012721T-complex protein 1, theta subunitTIGRFAMTIGR02346TIGR02346coord: 10..537
e-value: 2.0E-242
score: 803.3
IPR012721T-complex protein 1, theta subunitCDDcd03341TCP1_thetacoord: 19..527
e-value: 0.0
score: 766.383
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 229..354
e-value: 1.2E-37
score: 128.9
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 214..378
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 38..527
e-value: 6.5E-155
score: 516.4
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 43..55
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 22..149
coord: 405..527
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 155..219
coord: 371..405

Blast
[Close]
BLAST of TCONS_00022187-protein vs. Swiss-Prot (Human)
Match: TCPQ (T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4)

HSP 1 Score: 719.924 bits (1857), Expect = 0.000e+0
Identity = 356/545 (65.32%), Postives = 448/545 (82.20%), Query Frame = 0 
Query:    1 MALSIPKSV-MQNMMKDGAKSFRGLEEAVYRNIEACRQLTKILRSSYGPNGMNKMVINHLDKLFVTSDAATMLHELEVQHPAAKMLLFASQMQEQECGDGTNWVLIFSGALLNSAEELLRMGLSPAEVIEGYDMACKKALEILPDLVKYTVKDLRDKSEIIKAMKPVITSKQYGNEDFLSELITRACLSVYPQTGNFNVDNVRVQKILGSGLYSSEIVNGMVFRRHVEGDITKVANAKICVLSCPLDSMATETKGTVLIKNADELVNFSKGEEDLLESQIKSIADTGCNVIVTGGKAADMAVHFCNKYKIMVVRLMSKFELRRLCRATQATALPRITAPTPEEAGQCDSVALAEIGDTPVVVFRQDREDNAVATIVIRGATTNIMDDIERAVDDGVNCFKALTRDSRMLPGAGAVEMELAQRISTYGQTIPGLEQYAVKKFAEAFEIFPRTMAENAGVKATELISTLYAAHTSGEGNIGFDIEGEGIATCDVLERGILDSFLVKYWGLKFASNAASTVLRVDQIIMAKQAGGPKPKQ-NPNWDED 543
            MAL +PK+     M+K+GAK F GLEEAVYRNI+AC++L +  R++YGPNGMNKMVINHL+KLFVT+DAAT+L ELEVQHPAAKM++ AS MQEQE GDGTN+VL+F+GALL  AEELLR+GLS +EVIEGY++AC+KA EILP+LV  + K+LRD  E+   ++  I SKQYGNE FL++LI +AC+S++P +G+FNVDN+RV KILGSG+ SS +++GMVF++  EGD+T V +AKI V SCP D M TETKGTVLIK A+EL+NFSKGEE+L+++Q+K+IADTG NV+VTGGK ADMA+H+ NKY IM+VRL SK++LRRLC+   ATALPR+T P  EE G CDSV L+E+GDT VVVF+ ++ED A++TIV+RG+T N+MDDIERAVDDGVN FK LTRD R++PG GA E+ELA++I++YG+T PGLEQYA+KKFAEAFE  PR +AEN+GVKA E+IS LYA H  G  N+G DIE E  A  D+LE GILD++L KYW +K A+NAA TVLRVDQIIMAK AGGPKP     +WD+D
Sbjct:    1 MALHVPKAPGFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLVCCSAKNLRDIDEVSSLLRTSIMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPKPPSGKKDWDDD 545
The following BLAST results are available for this feature:
BLAST of TCONS_00022187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPQ0.000e+065.32T-complex protein 1 subunit theta OS=Homo sapiens ... [more]
back to top