TCONS_00022143-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022143-protein
Unique NameTCONS_00022143-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length334

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022143-protein ID=TCONS_00022143-protein|Name=TCONS_00022143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MSFQDDILSTHNEKRKKHGAPPLKWSDTLERKATKWAQHLAKIDQLKHEQ
NVEEGENIAMAGGKDLTGEGATTMWYDEIKDYNFNKQGGFNSKTGHFTQI
VWVASKQIGAGIAKSKSGRTYVVAKYLPAGNMMGNFPANVKPLGSALSKD
QNANGSPMTIADPKPTQKKRTTTSTPNRQTTTQGRPAIPLLAIMSFIAGL
ASFALYLAALVGTHWEKGDASNHLGLWKWCDINECIAIQDVPHALRATQS
LSILAAVAVFLALVLTVGKMVSPKIRYLVPASVFVMGGLFGIVSAAVYTA
EVSDSSLDYGWSYALAWVGVSFAVLASILMIASR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012421XLOC_012421Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022143TCONS_00022143Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR014044CAP_domain
IPR004031PMP22/EMP/MP20/Claudin
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 121..134
score: 42.63
coord: 23..41
score: 29.2
coord: 94..110
score: 47.06
coord: 71..84
score: 37.82
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 23..41
score: 36.18
coord: 93..112
score: 53.75
coord: 69..84
score: 39.84
IPR014044CAP domainSMARTSM00198SCP_3coord: 2..134
e-value: 4.6E-38
score: 142.4
IPR014044CAP domainPFAMPF00188CAPcoord: 8..126
e-value: 3.0E-21
score: 76.5
IPR014044CAP domainGENE3D3.40.33.10coord: 1..136
e-value: 1.4E-40
score: 138.4
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 2..141
IPR004031PMP-22/EMP/MP20/Claudin superfamilyPFAMPF00822PMP22_Claudincoord: 195..329
e-value: 3.5E-12
score: 46.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 137..334
e-value: 2.0E-4
score: 20.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 95..105
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 2..132
e-value: 2.19954E-69
score: 213.996

Blast
[Close]
BLAST of TCONS_00022143-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 4.655e-34
Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 0 
Query:    3 FQDDILSTHNEKRKKHGAPPLKWSDTLERKATKWAQHLAKIDQLKHEQNVEEG---ENIAMAGGKDLTGEGATTMWYDEIKDYNFNKQGGFNSKTGHFTQIVWVASKQIGAGIAKSKSGRTYVVAKYLPAGNMM--GNFPANVKP 142
            F +++L  HNE R+KHG PPLK    L R+A ++++ LA    LKH      G   EN+A A   D TG+     WY EIK+YNF +Q GF S TGHFT +VW  +K++G G A +  G ++VVA+Y PAGN++  G F  NV P
Sbjct:    9 FHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNF-QQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLP 151
The following BLAST results are available for this feature:
BLAST of TCONS_00022143-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR14.655e-3445.52Golgi-associated plant pathogenesis-related protei... [more]
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