TCONS_00022102-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022102-protein
Unique NameTCONS_00022102-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length382

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022102-protein ID=TCONS_00022102-protein|Name=TCONS_00022102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
METENLEEFVDLEFCSALSDKLEKLSDSLVEGETLEKDFKKGLTEDDHMT
STHAINSCPIEPENDDDTVETPLKQKIIKNRILSDSESDENESDRENADD
IKDSSNQNLNKNKNRILSDSENGENESDRDEQEVPAMSDKKSSDDKIEEF
GSQKELEKSLAECSQSDESKKEKSSSKKSGKRSSSSWVQCDTCEKWRCVD
TVDDIHSLANGKWVCAMNDDDRRNKCELSQESIPESDEEVDESSYVTYKP
GNLVLGKMAGYPWWPGIIEDDPDFESFFYLENKNDKIAASYHVTFFDKDV
SRAWLTDYCVRPFTGKEDLKDLGTMSFSGKNYARGVSKAIEDAKKALGYS
PEKRVDKYGFLKRFKNKRGSKKDSDKGLEEDW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012394XLOC_012394Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022102TCONS_00022102Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
IPR011124Znf_CW
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..126
NoneNo IPR availableGENE3D2.30.30.140coord: 243..358
e-value: 3.2E-19
score: 68.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..184
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 244..355
IPR000313PWWP domainSMARTSM00293PWWP_4coord: 248..314
e-value: 4.3E-9
score: 46.2
IPR000313PWWP domainPFAMPF00855PWWPcoord: 248..346
e-value: 6.5E-16
score: 58.5
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 250..305
score: 12.389
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 187..231
e-value: 1.1E-11
score: 44.5
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 181..234
score: 12.783

Blast
[Close]
BLAST of TCONS_00022102-protein vs. Swiss-Prot (Human)
Match: ZCPW1 (Zinc finger CW-type PWWP domain protein 1 OS=Homo sapiens GN=ZCWPW1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.005e-30
Identity = 76/240 (31.67%), Postives = 124/240 (51.67%), Query Frame = 0 
Query:  140 KKSSDDKIE--EFGSQKELEKSLAECSQSDESKKEKSSSKKSGKRSSSSWVQCD--TCEKWRCVDTVDDIHSLANGKWVCAMNDDDRRNKCELSQESIPESDEEVDESSYVTYKPGNLVLGKMAGYPWWPGIIEDDPDFESFFYLENKNDKIAASYHVTFFDKDVSRAWLTDYCVRPFTGKEDLKDLGTMSFSGKNYARGVSKAIEDAKKALGYSPEKRVDKYGFLKRF--KNKRGSKKD 373
            KK + +K+E  + G +   E  L +  Q     +++   + SG      WVQC    C KWR +    D   L +  W C  N D + N+C++ +E+    + +V   +Y +Y PG+++  K  GYPWWPG+IE DPD   +F   +  D + + YHVTFF + VSRAW+    ++ F  +E   +L  M     + ++ +  A+  A++A   S ++RV+ +GF  RF   N  G +KD
Sbjct:  207 KKEAHEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRLCGNIDPSVLPD-NWSCDQNTDVQYNRCDIPEETWTGLESDV---AYASYIPGSIIWAKQYGYPWWPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNF--QELSLELSVMKKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKD 440
The following BLAST results are available for this feature:
BLAST of TCONS_00022102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZCPW13.005e-3031.67Zinc finger CW-type PWWP domain protein 1 OS=Homo ... [more]
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