TCONS_00022085-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022085-protein
Unique NameTCONS_00022085-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022085-protein ID=TCONS_00022085-protein|Name=TCONS_00022085-protein|organism=Clytia hemisphaerica|type=polypeptide|length=115bp
MVTKEKNQTIFVKFDQFRIGNETSKYTMKISGQYSGNASGISTFLSFNNN
MKFSTYDSDNDLHKIDHCAAHFQAGWWYHGCHWSLLTGRYGSSDLVWITN
NAKSLELKFVEIKFR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012384XLOC_012384Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022085TCONS_00022085Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 1..115
e-value: 9.8E-4
score: -89.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 7..113
e-value: 3.0E-18
score: 66.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 1..115
score: 17.92
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 6..115
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 53..108
e-value: 1.6E-16
score: 59.7
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 1..52
e-value: 1.6E-12
score: 47.2

Blast
[Close]
BLAST of TCONS_00022085-protein vs. Swiss-Prot (Human)
Match: TENA (Tenascin OS=Homo sapiens GN=TNC PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 9.001e-17
Identity = 37/116 (31.90%), Postives = 61/116 (52.59%), Query Frame = 0 
Query:    4 KEKNQTIFVKFDQFRIGNETSKYTMKISGQYSGNASGISTFLSFNNNMKFSTYDSDNDLHKIDHCAAHFQAGWWYHGCHWSLLTGRYG----SSDLVWITNNAKSLELKFVEIKFR 115
            ++  +T F  +D+F +G+  ++Y +K+ G YSG A      ++++N   FST+D D D   I +CA  ++  +WY  CH   L GRYG    S  + W         ++F E+K R
Sbjct: 2077 RDHGETAFAVYDKFSVGDAKTRYKLKVEG-YSGTAG---DSMAYHNGRSFSTFDKDTD-SAITNCALSYKGAFWYRNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLR 2187
The following BLAST results are available for this feature:
BLAST of TCONS_00022085-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENA9.001e-1731.90Tenascin OS=Homo sapiens GN=TNC PE=1 SV=3[more]
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