TCONS_00021926-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021926-protein
Unique NameTCONS_00021926-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021926-protein ID=TCONS_00021926-protein|Name=TCONS_00021926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MSAAVFVNNLSRQNERSLNSVEIEEEPTTPRARAEIVVEMEICIDSVSSA
INAEKAGASRVELCSNLIEGGTTPSLGTFQVIKELTAIPVFVMVRPRGGD
FLYSDTEFDVMRKEIEIFKEHKADGFVFGILNSDGTVDKKRNKELLDLCR
PSKVTFHRAFDVTVDGNQALEHIIEMGFDRILTSGMEATVLEGLPFLKQL
VDQAGDRIIIVPGGGISEKNLSRILDGCNAKEFHGSARSSEPSGMEYTRS
GVPMGGALYPAENVIKTSNINRIRTMIDIAKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012303XLOC_012303Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021926TCONS_00021926Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023648Cu_homeostasis_CutC_dom
IPR005627Cu_homeostasis_CutC
Vocabulary: Biological Process
TermDefinition
GO:0055070copper ion homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055070 copper ion homeostasis
molecular_function GO:0005507 copper ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.380coord: 37..282
e-value: 1.9E-92
score: 308.4
IPR023648Copper homeostasis CutC domainPFAMPF03932CutCcoord: 39..238
e-value: 4.9E-70
score: 235.0
IPR023648Copper homeostasis CutC domainSUPERFAMILY110395CutC-likecoord: 40..280
IPR005627Copper homeostasis protein CutCHAMAPMF_00795CutCcoord: 38..281
score: 36.275

Blast
[Close]
BLAST of TCONS_00021926-protein vs. Swiss-Prot (Human)
Match: CUTC (Copper homeostasis protein cutC homolog OS=Homo sapiens GN=CUTC PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 8.835e-98
Identity = 131/242 (54.13%), Postives = 181/242 (74.79%), Query Frame = 0 
Query:   40 MEICIDSVSSAINAEKAGASRVELCSNLIEGGTTPSLGTFQVIKELTAIPVFVMVRPRGGDFLYSDTEFDVMRKEIEIFKEHKADGFVFGILNSDGTVDKKRNKELLDLCRPSKVTFHRAFDVTVDGNQALEHIIEMGFDRILTSGMEATVLEGLPFLKQLVDQAGDRIIIVPGGGISEKNLSRILDGCNAKEFHGSARSSEPSGMEYTRSGVPMGGALYPAENVIKTSNINRIRTMIDIAK 281
            ME+C+DSV SA+NAE+ GA R+ELCS L EGGTTPS+G  QV+K+   IPVFVM+RPRGGDFLYSD E +VM+ +I + K + ADG VFG L  DG +DK+    L+ +CRP  VTFHRAFD+  D   ALE ++ +GF+R+LTSG +++ LEGLP +K+L++QA  RI+++PGGGI+++NL RIL+G  A EFH SARS+  SGM++  S V MG +L  +E  +K +++ ++RT+  IAK
Sbjct:   28 MEVCVDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILEGSGATEFHCSARSTRDSGMKFRNSSVAMGASLSCSEYSLKVTDVTKVRTLNAIAK 269
The following BLAST results are available for this feature:
BLAST of TCONS_00021926-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CUTC8.835e-9854.13Copper homeostasis protein cutC homolog OS=Homo sa... [more]
back to top