TCONS_00021877-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021877-protein
Unique NameTCONS_00021877-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1899

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021877-protein ID=TCONS_00021877-protein|Name=TCONS_00021877-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1899bp
MGQEISREDAKEAVSSVLKLPIHDAQKSECKKHHRFQTVISSLWLNHIKE
EKISKLCLELSQLSQRGSIVDIFQYGHKFAKESNLCKVNVNVLKKDVSFC
IKNTELHGKVTNEQNPSIYDVFGMQYLHMQEQLCKYLSKYTTTMDKRKEK
KHKIIGWTEVKEFLQNTFHIEVIDLTNTSKSTTEREFSRTYQSTTTNSFF
APIEAIIESKEFVFVFEEYSPYDLKDALYYSPAIIGKSHINLNFLLYQIL
NTLMCLQRQQVYINTLLAPENLTLYHGTLWVGISVFDGVSATQILDQEPD
SQPLIKIYDGLNTNLDDKNILLTEKLSVYTSEWVNCRISNFDYLMILNKL
AGKKFGQALSHPVFPWVTDFSCNHGGYRDLKKTKFRLNKGDSQLDATFST
GVGNSAYGFGMMLNPIQHHVSDVLSDITYFMYHARKTSKDILCRHVRSRW
VPDEYPANVRRMYQWTPDECIPEFFYDPSIFKSIHDDLADLGLPEWINSP
EEFVKYHYTMLESPKVSSSLHHWIDLVFGYKLEGRAAKHAKNVHLALVDE
HKDLKNYGIVQLFNKHHPKRKSFTEDLITPVDVVDGPEVRPAREFSMSWE
YVDLGKSKDDSSLSSIGVAGGGGGGKDNEDGSKLPADSPIASVVQQQQRK
QTKSFVDVPSSVASVLLDDDSIDPAKIHQVKNNETLVFSDIMEQTERLLR
YEMMNNPPNAHGIGRYGIGTFSDTKIEMEVEYSHLTDMMKLYLCLVIEIV
CFKAFRTRTCVAPLEERFVQDLKILKISDSAPTWVKGAIDFAIDPRIFKE
NTTFTKDELPNRDELCLQALMNTMNQCFNFPTTFDKIFKFLSSLFSLLDP
SVNLQDNDTTTSNTYQQSLDIEMEKCARQLRTLLEHLDHETVHLLLMYLE
PLFNDNKYQLLMYIHIFPPLSVALGPNMSRTVFLKGLQRVLDNASKSPGI
SNLLHQSYLSNILQAFGQDYFLEYIMGLLLEILQSSDHNFQINPHEQPTL
TKMSTSSAQTSVIGTSLPNGSILSYEVTPYEAGKDSISLSSFNLDFMFSD
QQNNAFQLLSTDSHESESDSVNSAEFESDGFPKPGFGRGALVKTEAQKTH
TVLSYQEILSNSGCEEMIEVSSTSHSLPSFSYERERPFPALDQEYGRKDE
KADAPFTVLLQDNDLDDHIRGTDIGNVDNEDLEVLLMDMGTSVRSETMVT
EDGAQNVDLHRTVVDSLKWFIPWLGPNLTTENIAKPLLRNMSKIFMEITD
PEDSGDNDVIDRLLCKVSPHIECLVEVASIYGDNIVMSFYLPHIAKLIEN
ATNAASVSISLGSSLVSNLQLLMECCEKLQSEAIATHMEEFSVDFFQPLI
RLLSTVKPFSTGVITKQFLSRKVVDIIGMFCQKLRREYAQEVMAPLLQQF
FSRFDGIYALKTDTGGTSFITRKYTLLCKSLNEEDVNIRKPSPSMTHSTD
QSESKNRISKTLTIEEVLEDDQLGSNQDCADKFADVYDTFSPSLAYHAYV
LFCRVLGTHYLESTLYNSDLVWQLFTNHDKGLTHRMEDENEGSKSMTGQS
GKWMEPLRPKSLDESQLAQRVSSQHIDGTWLRNWQRTFDGPSRSLEFLNL
KLQTYAGHSSAIRDIYVVDNEHYFLSASRDKTVKLWLLKNHGNGTAHLGC
SGTYDRHTRAVFAVQGLEAKRVVASCDGEINIWDPITNDTLNEFSASRGH
SVTCIRTLPAPSPCIAAATSEGCLRIYDIRQKKGNALEWKVSPQTMTGVI
RSMCVDTSGTWIAAGFSAGIFSAIDIRAGILRGQARIHDGEISQMEAISG
TSFVSCADSIIRVWNDESGPSLAYKSSNEAFNSLLYTKQQLVWASSNKLT
IHNPDKITQYHSYKLPPDILKGSLSKLAILPMNQLYLFGIDTGNLVLVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012275XLOC_012275Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021877TCONS_00021877Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000409BEACH_dom
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR011989ARM-like
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000409BEACH domainSMARTSM01026Beach_2coord: 330..570
e-value: 6.5E-81
score: 284.8
IPR000409BEACH domainGENE3D1.10.1540.10coord: 322..583
e-value: 3.9E-59
score: 199.8
IPR000409BEACH domainPFAMPF02138Beachcoord: 332..554
e-value: 5.7E-39
score: 134.1
IPR000409BEACH domainPROSITEPS50197BEACHcoord: 318..593
score: 21.735
IPR000409BEACH domainCDDcd06071Beachcoord: 330..570
e-value: 1.59757E-73
score: 247.927
IPR000409BEACH domainSUPERFAMILY81837BEACH domaincoord: 323..570
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1687..1728
e-value: 1.5
score: 16.0
coord: 1647..1684
e-value: 2.1
score: 15.0
coord: 1778..1815
e-value: 46.0
score: 6.5
coord: 1598..1637
e-value: 1.3E-4
score: 31.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 1602..1636
e-value: 0.0021
score: 18.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1605..1636
score: 12.079
NoneNo IPR availableGENE3D2.40.50.140coord: 1535..1633
e-value: 8.6E-7
score: 28.0
NoneNo IPR availableGENE3D1.10.10.670coord: 1634..1697
e-value: 2.2E-9
score: 36.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 610..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1535..1554
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 1698..1899
e-value: 6.0E-16
score: 57.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 795..1440
e-value: 6.7E-6
score: 24.4
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1605..1824
score: 14.582
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 1601..1888

Blast
[Close]
BLAST of TCONS_00021877-protein vs. Swiss-Prot (Human)
Match: WDR81 (WD repeat-containing protein 81 OS=Homo sapiens GN=WDR81 PE=1 SV=2)

HSP 1 Score: 330.487 bits (846), Expect = 3.140e-91
Identity = 176/427 (41.22%), Postives = 246/427 (57.61%), Query Frame = 0 
Query:  160 VKEFLQNTFHIEVIDLTNTSKSTT-EREFSRTYQSTTTNSFFAPIEAIIESKEFVFVFEEYSPYDLKDALYYSPAIIGKSHINLNFLLYQILNTLMCLQRQQVYINTLLAPENLTLYHGTLWVGISVFDGVSATQILDQEPDSQPLIKIYDGLNTNLDDKNILLTEK-------------LSVYTSEWVNCRISNFDYLMILNKLAGKKFGQALSHPVFPWVTDFSCNHGGYRDLKKTKFRLNKGDSQLDATFSTGVGNSAYGFGMMLNP--IQHHVSDVLSDITYFMYHARKTSKDILCRHVRSRWVPDEYPANVRRMYQWTPDECIPEFFYDPSIFKSIHDDLADLGLPEWINSPEEFVKYHYTMLESPKVSSSLHHWIDLVFGYKLEGRAAKHAKNVHLALVDEHKDLKNYGIVQLFNKHHPKR 570
            V++ LQ  +    + +  T++  +  RE     + +         EA++ES E ++V   Y  + L D + +SPA +  S   + F+L+++L  +    RQ       LA   L+LYH      I+V + + +   LD     +P     +      D+  I+  E+             L     +WV+ RISNF YLM LN+LAG++ G    HPV PWV DF+  HG +RDL+K+KFRLNKGD QLD T+         G      P  + HH+SDVLSDITY++Y AR+T + +LC HVR++W P EYPA++ RM  WTPDECIPEF+ DPSIF+SIH D+ DL +P W +S +EFV  H  +LES +VS  LHHWIDL FGYKL+G+ A   KNV L LVD H  L +YG+VQLF++ HP+R
Sbjct:  177 VRQALQRVYGCSFLPVGETTQCPSYAREGPCPPRGSPACPSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLRAMDACHRQG------LACGALSLYH------IAVDEKLCSELRLDLSAYERPEEDENEEAPVARDEAGIVSQEEQGGQPGQPTGQEELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWVVDFTTPHGRFRDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHVPHHISDVLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTDPSIFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGKEAVKEKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591

HSP 2 Score: 221.09 bits (562), Expect = 1.241e-57
Identity = 189/772 (24.48%), Postives = 340/772 (44.04%), Query Frame = 0 
Query: 1202 DGAQNVDLHRTVVDSLKWFIPWLGPNLTTENIAKPLLRNMSKIFMEIT----------DPEDSGDNDVIDRLLCK---VSPHIECLVEVASIYGDNIVMSFYLPHIAKLIE--NATNAASVSISLGSSLVSNLQLLMECCEKLQSEAIATHMEEFSVDFFQPLIRLL-STVKPFSTGVITKQFLSRKVVDIIGMFCQKLRREYAQEVMAPLLQQFFSRFDGIYALKTDTGGTSFITRKYTLLCKSLNEEDVNIRKPSPSMTHSTDQSESKNRISKTLTIEEVLEDDQLGSNQDCADK--FADVYDTFSPSLAYHAYVLFCRVLGTHYLESTLYNSDLVWQLFTNHDKGLTHRMEDENEGSKSMTGQSGKW-------------------------------MEPLRPKSL---------------DESQLAQRV--SSQHIDGTWLRNWQRTFDGPSRS---LEFLNLKLQTYAGHSSAIRDIYVVDNEHYFLSASRDKTVKLWLLKNHGNGTAHLGCSGTYDRHTRAVFAVQGLEAKRVVASCDGEINIWDPITNDTLNEFSASRGH-SVTCIRTLPAPSPCIAAATSEGCLRIYDIRQKKGNALEWKVSPQTMTGVIRSMCVDTSGTWIAAGFSAGIFSAIDIRAG-ILRGQARIHDGEISQMEAISGTSFV-SCADSIIRVWND-ESGPSLAYKSSNEAFNSL-LYTKQQLVWASSNKLTIHNPDKITQYHSYKLPPDILKGSLSKLAILPMNQLYLFGIDTGNLVLVS 1899
            +G +   L  T    ++W    LGP + + ++A+ LLR ++  ++  T           P  S  N    R +       P + CL+ +A +YG+ ++   YLP+I+ L+   +A+  + ++    + L++ + L  +    L    +   +   S +   P++  L S V  F +G   +  L  K + +I + C ++ +E  Q+ ++  +  FF  F  ++                      L ++D+ +              +   R    L  + V  D Q    Q   D     ++   F+  +AY  YV F  +LG   +   + N +LV +L   + + ++    +      +M G   +W                                 P  P  L               D++ L Q +  S   + G WL  WQ    G S+      F  ++LQ++ GHS A++ +  + +E +FLS S+D+TV+LW L N+G+GT+       Y +H ++VF V  LEA + V SCDG +++WDP T  TL           +T +  +PAP   I  A+S+  LR  D R K G   E+++      G++R++ +  SG  + AGFS+G    +D R G +LRG    H+G+I Q++A+ G+  V S +D  + VW + E  P+  YKS+++  ++  LY  + +    SNK+ + +  +     + KL  +  +G+L+ LA+LP  +  L G D G + L++
Sbjct: 1214 EGKEQKILLDTACKMVRWLSAKLGPTVASRHVARNLLRLLTSCYVGPTRQQFTVSSGESPPLSAGNIYQKRPVLGDIVSGPVLSCLLHIARLYGEPVLTYQYLPYISYLVAPGSASGPSRLNSRKEAGLLAAVTLTQKIIVYLSDTTLMDILPRISHEVLLPVLSFLTSLVTGFPSGAQARTILCVKTISLIALICLRIGQEMVQQHLSEPVATFFQVFSQLH---------------------ELRQQDLKL--------------DPAGRGEGQLP-QVVFSDGQ----QRPVDPALLDELQKVFTLEMAYTIYVPFSCLLGD-IIRKIIPNHELVGELAALYLESISPSSRNPASVEPTMPGTGPEWDPHGGGCPQDDGHSGTFGSVLVGNRIQIPNDSRPENPGPLGPISGVGGGGLGSGSDDNALKQELPRSVHGLSGNWLAYWQYEI-GVSQQDAHFHFHQIRLQSFPGHSGAVKCVAPLSSEDFFLSGSKDRTVRLWPLYNYGDGTSETAPRLVYTQHRKSVFFVGQLEAPQHVVSCDGAVHVWDPFTGKTLRTVEPLDSRVPLTAVAVMPAPHTSITMASSDSTLRFVDCR-KPGLQHEFRLGGGLNPGLVRALAISPSGRSVVAGFSSGFMVLLDTRTGLVLRGWP-AHEGDILQIKAVEGSVLVSSSSDHSLTVWKELEQKPTHHYKSASDPIHTFDLYGSEVVTGTVSNKIGVCSLLEPPSQATTKLSSENFRGTLTSLALLPTKRHLLLGSDNGVIRLLA 1941
The following BLAST results are available for this feature:
BLAST of TCONS_00021877-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR813.140e-9141.22WD repeat-containing protein 81 OS=Homo sapiens GN... [more]
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