TCONS_00021779-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021779-protein
Unique NameTCONS_00021779-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021779-protein ID=TCONS_00021779-protein|Name=TCONS_00021779-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MDDGLPIVGPEVDLSQTPAINHKRTLAFLNHFITHTVRFLNRFSCVCEEK
LADMQRRIQRLEITLSILEAKLSSIPGLDEIAPIDTTPPPAAQTTSIETT
QQTPAQQQTPQANNGPKETDDTIPEPAAVEPKKPKMTVSKDPRYMKFFKM
VNFGVPSGAVKAKMAAEGLNPDLLDTPDAPMDGSSPPPQQQSDSSDEASD
EESDSDASSFTDSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012221XLOC_012221Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021779TCONS_00021779Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019309WASHC3
Vocabulary: Cellular Component
TermDefinition
GO:0071203WASH complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071203 WASH complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..137
IPR019309WASH complex subunit 3PFAMPF10152CCDC53coord: 29..175
e-value: 1.4E-48
score: 165.2

Blast
[Close]
BLAST of TCONS_00021779-protein vs. Swiss-Prot (Human)
Match: WASC3 (WASH complex subunit 3 OS=Homo sapiens GN=WASHC3 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.773e-57
Identity = 93/185 (50.27%), Postives = 129/185 (69.73%), Query Frame = 0 
Query:    2 DDGLPIVGPEVDLSQTPAINHKRTLAFLNHFITHTVRFLNRFSCVCEEKLADMQRRIQRLEITLSILEAKLSSIPGLDEIAPIDTTPPPAAQTTSIETTQQTPAQQQTPQANNGPKETDDTIPEPAAVEPKKPKMTVSKDPRYMKFFKMVNFGVPSGAVKAKMAAEGLNPDLLDTPDAPM-DGSS 185
            +DGLP++G  +DL++ PAI  KRT+AFLN F+ HTV+FLNRFS VCEEKLAD+  RIQ++E TL+IL+AKLSSIPGLD++  ++ +P      TS+       A  + PQ N+    T D+  + + V  +   +TV+KDPRY ++ KMV  GVP  A++ KM +EGL+PDLL+ PDAP+ DG S
Sbjct:    3 EDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKLSSIPGLDDVT-VEVSP---LNVTSVTNGAHPEATSEQPQQNS----TQDSGLQESEVSAEN-ILTVAKDPRYARYLKMVQVGVPVMAIRNKMISEGLDPDLLERPDAPVPDGES 178
The following BLAST results are available for this feature:
BLAST of TCONS_00021779-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WASC31.773e-5750.27WASH complex subunit 3 OS=Homo sapiens GN=WASHC3 P... [more]
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