TCONS_00021772-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021772-protein
Unique NameTCONS_00021772-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021772-protein ID=TCONS_00021772-protein|Name=TCONS_00021772-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
ALGNSVGIISGFDDDGDVVVSYPSGNRWTFNPAVLSKVNDLPSLDSDSLV
VQSLASMSLDEAEDGQRPSRGSRTGPFVEGDVVQILNNRDRVKLLQEGHG
EWTDAMNETLGKIGSVTQVYQDGDLKVEVNGTSWTFNRKCVVRIGSHRQL
HSDEAKSLLKKLFEGHSSKEPSELLVKAAAEGNLKQINELFXGESCS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012215XLOC_012215Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021772TCONS_00021772Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00021772-protein vs. Swiss-Prot (Human)
Match: MIB1 (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.557e-44
Identity = 87/191 (45.55%), Postives = 114/191 (59.69%), Query Frame = 0 
Query:    5 SVGIISGFDDDGDVVVSYPSGNRWTFNPAVLSKVNDLPSLDSDSLVVQSLASMSLDEAEDGQRPSRGSRTGPFVEGDVVQILNNRDRVKLLQEGHGEWTDAMNETLGKIGSVTQVYQDGDLKVEVNGTSWTFNRKCVVRIGSHRQLHSDEA----KSLLKKLFEGHSSKEPSELLVKAAAEGNLKQINELF 191
            + G + G D+D D+VV YPSGNRWTFNPAVL+K N + S D+               AE G        T  F  GD+VQ+  + +R+KLLQ GHGEW +AM  TLGK+G V Q+Y D DLKVEV GTSWT+N   V ++ S     S+ +      LLKKLFE   S + +E LVKAAA G++ ++ +L 
Sbjct:  281 TTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDA------------AQGAEGG--------TSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLLKKLFETQESGDLNEELVKAAANGDVAKVEDLL 451
The following BLAST results are available for this feature:
BLAST of TCONS_00021772-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIB17.557e-4445.55E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G... [more]
back to top