TCONS_00021770-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021770-protein
Unique NameTCONS_00021770-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length213

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021770-protein ID=TCONS_00021770-protein|Name=TCONS_00021770-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
MAAAASPINNFLAKQIGVRVIRGPDWKWGKQDGGEGHVGTVRSFESHEEV
VVVWDNGTAANYRCSGAYDLRIFDSGPAGIKHDGTQCCECQSNPIYGTLW
KCVECSEEMCSTCYHNDRHNLRHRFHQLVAPGSNKVLVEPRRKSKKITAR
GMFPGSRVIRGVDWHWESQDGVAGRRGKITEIQDWSLLLPRSAAYVVWDT
GAKNLYRLGSEGM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012214XLOC_012214Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021770TCONS_00021770Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010606Mib_Herc2
IPR000433Znf_ZZ
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010606Mib-herc2PFAMPF06701MIB_HERC2coord: 155..213
e-value: 6.8E-21
score: 74.2
coord: 17..73
e-value: 2.3E-18
score: 66.1
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 6..76
score: 28.901
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 144..213
score: 29.896
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 81..127
score: 8.528
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 65..140
NoneNo IPR availableSUPERFAMILY159034Mib/herc2 domain-likecoord: 14..75
NoneNo IPR availableSUPERFAMILY159034Mib/herc2 domain-likecoord: 146..213

Blast
[Close]
BLAST of TCONS_00021770-protein vs. Swiss-Prot (Human)
Match: MIB1 (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.618e-105
Identity = 147/206 (71.36%), Postives = 169/206 (82.04%), Query Frame = 0 
Query:    9 NNFLAKQIGVRVIRGPDWKWGKQDGGEGHVGTVRSFESHEEVVVVWDNGTAANYRCSGAYDLRIFDSGPAGIKHDGTQCCECQSNPIYGTLWKCVECSE-EMCSTCYHNDRHNLRHRFHQLVAPGSNKVLVEPRRKSKKITARGMFPGSRVIRGVDWHWESQDGVAGRRGKITEIQDWSLLLPRSAAYVVWDTGAKNLYRLGSEGM 213
            N  + + +G RV+RGPDWKWGKQDGGEGHVGTVRSFES EEVVVVWDNGTAANYRCSGAYDLRI DS P GIKHDGT C  C+  PI G  WKC EC+  ++C+ CYH D+H+LRHRF+++  PGS +VL+E RRKSKKITARG+F G+RV+RGVDW WE QDG  GRRGK+TEIQDWS   P SAAYV+WD GAKNLYR+G EGM
Sbjct:    7 NRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGM 212
The following BLAST results are available for this feature:
BLAST of TCONS_00021770-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIB12.618e-10571.36E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G... [more]
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