TCONS_00021763-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021763-protein
Unique NameTCONS_00021763-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length573

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021763-protein ID=TCONS_00021763-protein|Name=TCONS_00021763-protein|organism=Clytia hemisphaerica|type=polypeptide|length=573bp
MRSKRSNKVQSLCKHHLDFKPNPSPTSSTEKSGLLRVHVMKASVHSQHQK
LMNNLKKSCRESENFGPNSLVKQLQSLGKMFAPPKNSDLSQINETPAPQP
AMKRDQPSERELIESLNYVLPIEKFNHFKILLPKSKLHVTTPDGEEVIVE
PCDKHTKVKATHETHEGLMKRHKTTKDVLQLFSKQKSRQLNANNWRKDDS
FFIYVFENKKFLFDKSTGEISCFPTPDAMKPKPSNKSKGEPPQLERNIVG
KSFGTFINDFCKKPVEGKEYPSTNQFNVRSNHNIQLHVLQPVEQKANFRF
VIHSSPFGSFIERAGTSHIATGNRKQTARKNNRDYKDREEEKLIELIEQI
PNQYLPDKKQRNKYSIVRGSIDYIKNLERKVREQLGIPQVEASEDPLDVI
ETAQPTDHSQHPMELSASQEDHEDITEYEEEEVYDNAFEDFFQLLCNPIS
STRTTNHGDNEGNQTTTIQFPSKEECSLFQSLSAMEQNLLRASQEDEQLD
RFVSIEERFQLNYSDVNLNSLQGEYVINDENESEVQDEVMYSAEQPNIMN
SPISKDTDRVFQSPIARNNEMQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012213XLOC_012213Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021763TCONS_00021763Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 313..386
e-value: 7.1E-6
score: 25.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 323..377
score: 10.213
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 322..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..106

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021763-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top