TCONS_00021711-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021711-protein
Unique NameTCONS_00021711-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length487

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021711-protein ID=TCONS_00021711-protein|Name=TCONS_00021711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
MEAKGYSFELAGQEVSEFRCNICKLLLREATELPCTHMFCQACLWEWHMD
PKSKAGKSLDEQTDFYECPDCHQSYFIEQIRRSAVTDKVITASLMIKCHF
SKHGCSWKGHIVQFQEHKLECDFTPANCPFQGCYKVLNRGQLEEHKENCQ
HRFATCKECGKNYESKKGHSCTIECPNNGCFIQVPEDKMAAHRERCLKEL
VRCGSFMCNASRSGKLKREDLLKHCINCSDAKTIILIKKDEYNERRWKIR
KSIGEARDILNQRVSDMEKYEREIEDLTPKLEKVRKLQDAKKNGDQPASL
PVENFQGHLEDQGILTSKLISGPTSVDDVMELAETINKHRNVKPIIRDLI
NHSIMSRSNKCLAFLLVRYKSEITEKDMKRYWSKALTCSHHGIHPSIPIL
LQFHPNLLNAKAGTNKHSGSALNIAMFSHLPELFKYLINQPGIDLELLEF
EKFEKESRKQIYEFKQILKNKKKIFKEEGGLFGFLKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012180XLOC_012180Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021711TCONS_00021711Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..287
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 14..78
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 20..71
e-value: 2.1E-5
score: 33.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 20..72
score: 10.852
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 20..74
e-value: 0.00543822
score: 33.9584
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..89
e-value: 5.1E-11
score: 41.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 167..225
e-value: 0.0013
score: 18.4
coord: 90..134
e-value: 1.5E-13
score: 50.3
coord: 135..166
e-value: 0.0051
score: 16.5
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 20..71
e-value: 8.9E-5
score: 22.2
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 35..44
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 117..177
score: 8.886
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 93..161

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021711-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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