TCONS_00021649-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021649-protein
Unique NameTCONS_00021649-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length693

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021649-protein ID=TCONS_00021649-protein|Name=TCONS_00021649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=693bp
MELLKGIVLHCESKSQPVEQELKDTFKKYVQKCKELTDSNVLLNQGTLLV
FKINNVFYSLVVELMDVVNALCAVVDIENLAFLTYEIDEELTTPASLLVE
DARTKPSSEILQEGNIGEILNVIQTVIDSSDDFQYGPLVAGNQQSILLHG
SGDAVSTGIGKSYILHCLKNRFAEKIDYIQTIECVYLHGKKPSKIAAHFT
EILDQIQVGSSALVLLDDLDELMPNVDIAQDGMARNQYVIRIVCAFQDFI
ETIRSSGKPIHILATCSSLDRIHKSLLPESNTHIFHQFIELPSNFDFPTD
FFINCQQFSLTKNVRCRLTCSENDTFEDVSKRLQGVNLRDFSIFLQRVCN
TIVKVTDSSTNNSEFEVKVTTNELYSIFKDFKHSSKHNIELHKPNPIKWS
DIGGLLSVKKLLIETLIWPFKYRELFDKCGIKLQSGALLYGPPGTAKTLL
ASAAAHESGLNFITIKGPELLSKYVGSSEGNVRDLFARAQAAKPCLLFFD
ELESLAPRRGHDNTGVTDRVVNQLLTQLDGVESCEGVYVIAATSRPDLID
PALLRPGRIDKSVLCPLPNQNERKEILEILSRDLDLHQDVDFKDLASQTE
FFSGADLKALLLNAQLEKIHVLMASRNQLSDDQPVILSMREFDKALSYTQ
ASVSFKERQHYQTIFENFKNGRKTDSTGQNTQLTEQLQRVTLA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012140XLOC_012140Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021649TCONS_00021649Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 433..569
e-value: 9.9E-15
score: 64.9
coord: 142..290
e-value: 2.5
score: 9.6
NoneNo IPR availableGENE3D1.10.8.60coord: 575..671
e-value: 1.5E-21
score: 75.8
NoneNo IPR availableGENE3D3.40.50.300coord: 141..294
e-value: 2.6E-5
score: 23.3
NoneNo IPR availableGENE3D3.40.50.300coord: 386..574
e-value: 2.7E-53
score: 179.8
NoneNo IPR availableCDDcd00009AAAcoord: 435..567
e-value: 5.43719E-24
score: 97.9871
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 438..565
e-value: 7.4E-41
score: 139.6
coord: 157..277
e-value: 3.7E-5
score: 24.0
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 537..555
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 110..385
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 396..668

Blast
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BLAST of TCONS_00021649-protein vs. Swiss-Prot (Human)
Match: PEX1 (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.824e-115
Identity = 218/500 (43.60%), Postives = 296/500 (59.20%), Query Frame = 0 
Query:  138 LVAGNQQSILLHGSGDAVSTGIGKSYILHCLKNRFAEKID-YIQTIECVYLHGKKPSKIAAHFTEILDQIQVGSSALVLLDDLDEL-----MPNVDIAQDGMARNQYVIRIVCAFQDFIETIRSSGKPIHILATCSSLDRIHKSLLPESNTHIFH--QFIELPSNFDFPTDFFINCQQFSLTKNVRCRLTCSEND----TFEDVSKRLQGVNLRDFSIFLQRVCNTIVKVTDSSTNNSEFEVKVTTNELYSIFKDFKHSSKHNIELHKPNPIKWSDIGGLLSVKKLLIETLIWPFKYRELFDKCGIKLQSGALLYGPPGTAKTLLASAAAHESGLNFITIKGPELLSKYVGSSEGNVRDLFARAQAAKPCLLFFDELESLAPRRGHDNTGVTDRVVNQLLTQLDGVESCEGVYVIAATSRPDLIDPALLRPGRIDKSVLCPLPNQNERKEILEILSRDLDLHQDVDFKDLASQTEFFSGADLKALLLNAQLEKIHVLMAS 625
            LVAG +   LL   G     G GKS +   +     +K+D +++ ++C  L GK+   I         +      ++VLLDDLD +     +P  + + D +       R+  A  D I+   S G  + ++AT  S   +H  L+     HIF   Q I+ P N +   +   N         ++ +L C  N       + V+K   G   RDF++ + R  ++ +     ST     ++ +TT +     + F  +S  ++ LHKP  + W  IGGL  V+++L++T+  P KY ELF    I+ ++G LLYGPPGT KTLLA   A ES +NFI++KGPELLSKY+G+SE  VRD+F RAQAAKPC+LFFDE ES+APRRGHDNTGVTDRVVNQLLTQLDGVE  +GVYV+AATSRPDLIDPALLRPGR+DK V CP P+Q  R EIL +LS  L L  DVD + +AS T+ F+GADLKALL NAQLE +H ++ S
Sbjct:  586 LVAGLRNGALLLTGG----KGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQ----RLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQ-PPNQEQRCEILCNV--------IKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSISTRE---KLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLS 1065
The following BLAST results are available for this feature:
BLAST of TCONS_00021649-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEX11.824e-11543.60Peroxisome biogenesis factor 1 OS=Homo sapiens GN=... [more]
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