TCONS_00021579-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021579-protein
Unique NameTCONS_00021579-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length595

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021579-protein ID=TCONS_00021579-protein|Name=TCONS_00021579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=595bp
MNDSWFVEHVAVEHDTEADVHFPLSRWLPPYKAMQFNKFDSQLPQMVKKN
SPELYKQREAELEQKKKEFAYQPIGDIKGMPRTVKTLPPEEAFSRDYFAE
VGFTGLTGKISDSLKKMRYEDEFSSFNDIYKVYGGPLSPFRIPDGHAAWR
TDEKFAQLRLTGPNCTVIRGVLKDGGLPENFAVDTSLLETHFLQGQTFEQ
AYKNDRLFYIDYKDLDGYIAKASKERMVAPIALFYARMDGILIPLAIQLF
QIASKTNPVFYPPPIDEERVWLHAKFWFGVADSNFHEPVTHLMGTHLVAG
DFVTCFHNTISPSHPVYKLMLPHFIFLLNINTDGMPVLTAENGAFNNILV
FGLENCYDLMLKKYQSFSLKDQGWLENDIENRGVKNLPNYHYYEDAKPMF
EAIHNYIQQCIKTIYDEDKNVEEDFELQNFAQLLCNPKEGMKGVLGNGQF
TTMEDLTKTLSTLVFILTNVHAAANFNQYDEYAYPPNFPFRLKGSPPTNK
DSISEEDLVKLFDVNITLDTMELGRTLSLQGSNKIGNYETNYEFKPEILE
HYLGFINALAKIQTDNDEKNLRRRNPYPWLSPRXQRFKQTMMRRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012104XLOC_012104Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021579TCONS_00021579Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
IPR001024PLAT/LH2_dom
IPR020834LipOase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013819Lipoxygenase, C-terminalPRINTSPR00087LIPOXYGENASEcoord: 268..285
score: 33.57
coord: 286..303
score: 38.73
coord: 306..326
score: 36.39
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 143..502
e-value: 4.8E-45
score: 154.1
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 44..595
score: 71.66
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 50..584
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 1..63
e-value: 5.8E-4
score: 19.3
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 1..42
score: 10.089
NoneNo IPR availableGENE3D3.10.450.60coord: 165..282
e-value: 2.8E-23
score: 81.9
NoneNo IPR availableGENE3D1.20.245.10coord: 283..592
e-value: 1.8E-69
score: 234.0
IPR020834Lipoxygenase, conserved sitePROSITEPS00081LIPOXYGENASE_2coord: 313..323

Blast
[Close]
BLAST of TCONS_00021579-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 7.346e-56
Identity = 162/609 (26.60%), Postives = 281/609 (46.14%), Query Frame = 0 
Query:    1 MNDSWFVEHVAVEHDTEADVHFPLSRWLPPYKAMQFNKFDSQLPQMVKKNSPELYKQ-REAELEQKKKEFAYQPIGDIKGMPRTV-----KTLPPEEAFSRDYFAEVGFTGLTGKISDSLKKMRYE-------DEFSSFNDIYKVYGGPLSPFRIPDGHAAWRTDEKFAQLRLTGPNCTVIRGVLKDGGLPENFAVDTSLLETHFLQGQTFEQAYKNDRLFYIDYKDLDGYIAK----ASKERMVAPIALFYARMDGILIPLAIQLFQIASKTNPVFYPPPIDEERVWLHAKFWFGVADSNFHEPVTHLMGTHLVAGDFVTCFHNTISPSHPVYKLMLPHFIFLLNINTDGMPVLTAENGAFNNILVFGLENCYDLMLKKYQSFSLKDQGWLENDIENRGV---KNLPNYHYYEDAKPMFEAIHNYIQQCIKTIYDEDKNVEEDFELQNFAQLLCNPKEGMKGVLGNG---QFTTMEDLTKTLSTLVFILTNVHAAANFNQYDEYAYPPNFPFRLKGSPPTNKDSISEEDLVKLFDVNITLDTMELGRTLSLQGSNK----IGNYETNYEFKPEILEHYLGFINALAKIQTDNDEKNLRRRNPYPWLSP 582
            +ND W+++++ ++      + FP  RW+     +      ++L    + +   + KQ R  ELE ++K++ +       G P ++     K LP +  F  D    V F     K  ++L   R+        ++F+ F  I+      +S  R+ +    W+ D  F    L G N  +IR   +   LPE   V T ++E    +  + EQ  +   +F +D++ LDG  A      + + + API L Y  +   ++P+AIQL QI    NP+F P   D +  WL AK W   +D + H+ +THL+ THLV+  F    +  +   HP++KL++ H  F + INT     L  E G F+     G      ++ +  +  +     + E  I+ RG+   +++P Y Y +D   ++EAI  +  + +   Y+ D+ VEED ELQ+F   +     GM+G   +G      + E L++ L+ ++F  +  HAA NF QYD  ++ PN P  ++  PPT K  ++ E +V     +       LG   +L    +    +G Y   +  +  + E    F   L  I +   E+N +++ PY +LSP
Sbjct:   77 LNDDWYLKYITLKTPHGDYIEFPCYRWITGDVEVVLRDGRAKL---ARDDQIHILKQHRRKELETRQKQYRWMEWN--PGFPLSIDAKCHKDLPRDIQF--DSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIFVKISNTISE-RVMNH---WQEDLMFGYQFLNGCNPVLIRRCTE---LPEKLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPS--DAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEA-IKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVY--VYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLP-DRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNKKKQLPYYYLSP 665
The following BLAST results are available for this feature:
BLAST of TCONS_00021579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX57.346e-5626.60Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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