TCONS_00021562-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021562-protein
Unique NameTCONS_00021562-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length555

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021562-protein ID=TCONS_00021562-protein|Name=TCONS_00021562-protein|organism=Clytia hemisphaerica|type=polypeptide|length=555bp
MKQKNPAYAGMSRSELMVMTVTDIISQLIAAHERKEDINLNKLKNAVSRK
YGLSTQPRLVDIIAAVPANYRKVLVPKLKAKPVRTASGIAVVAVMCKPHR
CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQT
RHRVEQLKSLGHSVDKVEFIVMGGTFMALDEEYRDYFIRNLHDALSGHTS
SSVEEAVRYSEKSKTKCIGITIETRPDYCLKRHLSSMLQYGCTRLEIGVQ
SVYEDVARDTNRGHTVKAVCESFHLGKDSGYKVIAHMMPDLPNVDLERDI
EQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYKSYSPNTLIDL
VARILALVPPWTRIYRVQRDIPMPLVTSGVEHGNLRELALARMKDFGTEC
RDVRTREVGIQEIHKNIRPYEIELIRRDYFANGGWETFLSYEDPAQDILV
GLLRLRKCSKEVFRPELKGEQCSIVRELHVYGSVVPVRSRDPTKFQHQGF
GTLLMEEAARIAREEHFSTKIAVISGVGTRDYYRKLGYELDGPYMSRKLT
DFEDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012089XLOC_012089Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021562TCONS_00021562Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR007197rSAM
IPR005910Hist_AcTrfase_ELP3
IPR032432Radical_SAM_C
IPR000182GNAT_dom
IPR013785Aldolase_TIM
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
GO:0008080N-acetyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0008080 N-acetyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elongator protein 3/MiaB/NifBSMARTSM00729MiaBcoord: 91..353
e-value: 5.1E-29
score: 112.4
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 109..305
e-value: 6.0E-19
score: 68.9
NoneNo IPR availableGENE3D3.40.630.30coord: 416..555
e-value: 4.6E-12
score: 45.4
NoneNo IPR availableSFLDSFLDG01086elongater_protein-likecoord: 44..399
e-value: 0.0
score: 378.4
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 98..335
e-value: 1.24801E-12
score: 65.0473
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 121..360
IPR005910Histone acetyltransferase ELP3TIGRFAMTIGR01211TIGR01211coord: 29..549
e-value: 1.4E-228
score: 757.6
IPR005910Histone acetyltransferase ELP3PIRSFPIRSF005669HAT_Elp3coord: 2..550
e-value: 4.8E-250
score: 828.5
IPR032432Radical SAM, C-terminal extensionPFAMPF16199Radical_SAM_Ccoord: 315..394
e-value: 3.4E-34
score: 116.6
IPR000182GNAT domainPFAMPF00583Acetyltransf_1coord: 400..538
e-value: 6.5E-10
score: 39.2
IPR000182GNAT domainPROSITEPS51186GNATcoord: 398..555
score: 10.951
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 62..415
e-value: 8.0E-32
score: 110.5
IPR016181Acyl-CoA N-acyltransferaseSUPERFAMILY55729Acyl-CoA N-acyltransferases (Nat)coord: 355..545

Blast
[Close]
BLAST of TCONS_00021562-protein vs. Swiss-Prot (Human)
Match: ELP3 (Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2)

HSP 1 Score: 942.569 bits (2435), Expect = 0.000e+0
Identity = 456/549 (83.06%), Postives = 498/549 (90.71%), Query Frame = 0 
Query:    1 MKQKNPAYAGMSRSELMVMTVTDIISQLIAAHERKEDINLNKLKNAVSRKYGLSTQPRLVDIIAAVPANYRKVLVPKLKAKPVRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKSLGHSVDKVEFIVMGGTFMALDEEYRDYFIRNLHDALSGHTSSSVEEAVRYSEKSKTKCIGITIETRPDYCLKRHLSSMLQYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLGKDSGYKVIAHMMPDLPNVDLERDIEQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYKSYSPNTLIDLVARILALVPPWTRIYRVQRDIPMPLVTSGVEHGNLRELALARMKDFGTECRDVRTREVGIQEIHKNIRPYEIELIRRDYFANGGWETFLSYEDPAQDILVGLLRLRKCSKEVFRPELKGEQCSIVRELHVYGSVVPVRSRDPTKFQHQGFGTLLMEEAARIAREEHFSTKIAVISGVGTRDYYRKLGYELDGPYMSRKL 549
            M+QK      +S +ELM++T+ D+I QLI AHE+ +DI+LNK+K   + KYGLS QPRLVDIIAAVP  YRKVL+PKLKAKP+RTASGIAVVAVMCKPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARY+PFLQTRHR+EQLK LGHSVDKVEFIVMGGTFMAL EEYRDYFIRNLHDALSGHTS+++ EAV+YSE+S TKCIGITIETRPDYC+KRHLS ML YGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHL KDSG+KV+AHMMPDLPNV LERDIEQF EFFENPAFR DGLK+YPTLVIRGTGLYELWK+GRYKSYSP+ L++LVARILALVPPWTR+YRVQRDIPMPLV+SGVEHGNLRELALARMKD G +CRDVRTREVGIQEIH  +RPY++EL+RRDY ANGGWETFLSYEDP QDIL+GLLRLRKCS+E FR EL G   SIVRELHVYGSVVPV SRDPTKFQHQGFG LLMEEA RIAREEH S KIAVISGVGTR+YYRK+GY L GPYM + L
Sbjct:    1 MRQKRKG--DLSPAELMMLTIGDVIKQLIEAHEQGKDIDLNKVKTKTAAKYGLSAQPRLVDIIAAVPPQYRKVLMPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLVELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGIQCRDVRTREVGIQEIHHKVRPYQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGG-GVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKIGYRLQGPYMVKML 546
The following BLAST results are available for this feature:
BLAST of TCONS_00021562-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ELP30.000e+083.06Elongator complex protein 3 OS=Homo sapiens GN=ELP... [more]
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