TCONS_00021556-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021556-protein
Unique NameTCONS_00021556-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length305

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021556-protein ID=TCONS_00021556-protein|Name=TCONS_00021556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
NRYNFHTCYMKMKEAFIIFLLLVASYLMKVVNATPYFPTCPTCPKGQGLN
EPTVDSHHCYGTTKCIPCELGVNFNEYDDSMRLCSNCSKCGDNEVATQNC
TLTQNYICDCLPGFGRNSIETCTPCCELYCEENEQMSARNKIYCSPKSIQ
NCRCDGNIVISPSPTDSTPKTTTTPAMRNTTEAVNNNDTKDTKVNVTVIC
IFVFTVLVIGIAAFCIYRRYGFKNCRTSTDELVHFDVNQSERINIFTIPS
ESTDSRNAAPDQDLHLAGVPENEEVEENICLLDNNNDNENGGDDDATRLP
VQDSN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012086XLOC_012086Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021556TCONS_00021556Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001368TNFR/NGFR_Cys_rich_reg
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.50.10coord: 31..96
e-value: 6.3E-9
score: 35.5
NoneNo IPR availableGENE3D2.10.50.10coord: 97..125
e-value: 1.8E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..305
NoneNo IPR availableCDDcd00185TNFRSFcoord: 39..125
e-value: 1.54626E-9
score: 52.5967
IPR001368TNFR/NGFR cysteine-rich regionPROSITEPS00652TNFR_NGFR_1coord: 68..108
IPR001368TNFR/NGFR cysteine-rich regionPROSITEPS50050TNFR_NGFR_2coord: 67..108
score: 10.707

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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