TCONS_00021391-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021391-protein
Unique NameTCONS_00021391-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1526

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021391-protein ID=TCONS_00021391-protein|Name=TCONS_00021391-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1526bp
GAALTLCDTCKDDNTGVQTSYNINDLEIDYSTSVLRFNLQPDTKLTARAH
YNINKGSVTGIKNLNTISSITRYMDRSLGRRISFILNSARKYPVIRQALS
KTSSSLVKKVKELSYLVSRGKPTFEDVFTRLEDIKMVGMSFTDALVAVND
AVANKESSSISGRISNFIRGFQKLASRLYNLKPEAETDGTVETDNGLSVN
LIGELCVYQLCFKNNEIEIQDLKTSCQECVDMQYFRNLDPKDFVLIKMRS
RKTKQLGGTSGIRIVKGSVTTLAISKVAGINGQLGDIRMSIPAIAVFLGN
VHNVTISINQSSLSYQLQNVTFAGTDFPFNVKVNAPFNPATTWDSIRFKY
KASPSSGDLKQKMVTLSDSFINGIAKHTTIRIQNATDSLNKAKTTLSASE
TNLEGLKKDYEQKRLKYLKSESDYQTNKTVYERVKKEFRGYFSLKFYKEM
QSNLSNVCKFEDCQDVCHTMRLYDLCQKSKTIEAKEMRCFQQRTVDRTTV
LEDFKNMCDLTKRNFRTIYTGTCQAGKQQKLQSSLTTIGAGIGSFFGPVG
AGVGAAVGYVLSRFSSCDTSYEVIKEITNYQVACTQKKSTTRVKIFFVTK
CNSFPVNVHSEFTEPEICKVTNTSCIQVTDGACMSRNVECRKRRDIERRK
LLGKIGAFKNWWADLDGNQTKLDSLWIKKDKANIEMMEAKRLYERQNTIA
VIQKRDIKRFQNLLDNVYTTLTLEKCVFDFHQRSNRSKSILKFSDIKFET
DVSNRENILLELAIDGDDYQGKQKTRFVWEMDDPDAISLERNILQMVQNY
LCKQHTKRRRRSITEMISPAPLGRHDDFIGIDLPHNVTDHQIHCLHAKTI
LDYLQHVVKSLVLELEATHIEYNDLLFDVRSIETVLKRLKTLPTNELIQD
QIKLLQSAINTGRKSLSTISSDEVLKSWKLKMEIYTANNNFTACLNFEDC
LDVAFQNLHHFPNSYLVTRQNFLXLDYLQHVVKSLVLELEATHIEYNDLL
FDVRSIETVLKRLKTLPTNELIQDQIKLLQSAINTGRKSLSTISSDEVLK
SWKLKMEIYTANNNFTACLNFEDCLDVAFQNLHHFPNSYLVTRHNFLVNL
DNLKESILGVQQTQQDSFRQLEIKVNKTSLQFLSLKNKLLYCESAPKAKL
NSPGQIDALRSQKIILQCSAESKTKLSFAWKRNDEILPFEKTDKLAIYVH
QSTEGQYRCIAWNQFGNSTSNSTLVVLRQKPVVLKQPESVTYLLTQTKVK
PTFICNVTGDPLPKIFWHHQPFQQKTSLKLQERKPILTLKTPTLSSSGFY
YCFVGNKFGSVYSKKARLDIVKPILPNQKISMTFDLSIGNVEKINKTSYK
ENLRNTTSTSNEKFNLDLESSGEKKVKFEVNFEENDTRIDDGNSLLYFDS
IADGGDDLTMVKTVSNKRFTLSNELGSVVSKLERLGNNNNKDSDEIKNSM
VIGFDGNRCPNGHQLHSNGYACVACTPGSFEWNRKCLQCAIGTYQSRSGM
TSCDQCMDHKVTETVGSTSPSDCIDP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011976XLOC_011976Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021391TCONS_00021391Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 382..416
NoneNo IPR availableGENE3D2.10.50.10coord: 1459..1525
e-value: 6.9E-6
score: 25.8
NoneNo IPR availableCDDcd00096Igcoord: 1252..1311
e-value: 6.35033E-6
score: 44.7875
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 1478..1523
e-value: 1.2E-7
score: 41.4
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 1484..1523
e-value: 1.2E-8
score: 34.4
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 1153..1227
e-value: 0.33
score: 20.0
coord: 1237..1321
e-value: 0.81
score: 18.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1213..1257
e-value: 0.011
score: 15.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1258..1321
e-value: 7.0E-9
score: 35.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1143..1212
e-value: 2.3E-9
score: 36.8
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1231..1319
score: 9.446
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1146..1225
score: 9.065
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 1205..1313
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 1152..1224

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021391-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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