TCONS_00021349-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021349-protein
Unique Name	TCONS_00021349-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	357

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021349-protein ID=TCONS_00021349-protein|Name=TCONS_00021349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MSIDIPSKLKCVMFCDFHATLGPQIKYQQPVDFINKDEMDSIAPYIITKP
TFQGYLISLKAFGYTFMGYPIVISNNKYKRNALFFNVVFVFDEADDVKEF
EPVVTKLAGYMKTLELESEYISDKETEKNIPEILKKILNDLSSTGECTIP
VNHCNTIYLKVNTQPIEPPLVLDHHVPIFNWSKSAVDSQHWNLTAKRVLP
YIDGFNHVQKIATLANVDLALVRSALQTLVFHGVLELTPIFLYSNMYAVK
PEISSLYRDEAFQKECVSFVARDKTNLPEFRDVFMLYCALGPGISVSALC
GRHDLQELGIDEKKLILFGIVKKIIHKLCKFPVLTSPDSLSLVIREKSRW
MTGYYDY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011959	XLOC_011959	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021349	TCONS_00021349	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009348	NPR2

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009348	Nitrogen permease regulator 2	PFAM	PF06218	NPR2	coord: 9..277 e-value: 2.3E-59 score: 201.2

Blast

[Close]

BLAST of TCONS_00021349-protein vs. Swiss-Prot (Human)
Match: NPRL2 (GATOR complex protein NPRL2 OS=Homo sapiens GN=NPRL2 PE=1 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 1.206e-103
Identity = 148/350 (42.29%), Postives = 225/350 (64.29%), Query Frame = 0

Query:    8 KLKCVMFCDFHATLGPQIKYQQPVDFINKDEMDSIAPYIITKPTFQGYLISLKAFGYTFMGYPIVISNNKYKRNALFFNVVFVFDEADDVKEFEPVVTKLAGYMKTLELESEYISDKETEKNIPEILKKILNDLSSTGECTIPVNHCNTIYLKVNTQPIEPPLVLDHHVPIFNWSKSAVDSQHWNLTAKRVLPYIDGFNHVQKIATLANVDLALVRSALQTLVFHGVLELTPIFLYSNMYAVKPEISSLYRDEAFQKECVSFVARDKTNLPEFRDVFMLYCALGPGISVSALCGRHDLQELGIDEKKLILFGIVKKIIHKLCKFPVLTSPDSLSLVIREKSRWMTGYYDY 357
            +++C+ F +FH TLGP+I YQ P DFI+++  D++  YIITKP  Q  LI++ A     +G P+ I + KY RNAL FN+ FV D        EP+V KLAGY+ TLELES ++S +E+++ +  I+  +L +L+++G CT+P++  NTI+LKV  Q  +PP+  ++ VP+F   K    +  W+LT +++LPYIDGF H+QKI+  A+V+L LVR A+Q L+++GV+ L  I  YSN+Y   P++  L  D++ Q+ C+S+V +        RDVF LYC+L PG +V  L GRH  Q   +DE+KLI FG++K +I +L K+PV  + +  S      +R  TG + Y
Sbjct:    6 RIECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIGCPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSMEESKQKLVPIMTILLEELNASGRCTLPIDESNTIHLKVIEQRPDPPVAQEYDVPVFTKDKEDFFNSQWDLTTQQILPYIDGFRHIQKISAEADVELNLVRIAIQNLLYYGVVTLVSILQYSNVYCPTPKVQDLVDDKSLQEACLSYVTKQGHKRASLRDVFQLYCSLSPGTTVRDLIGRHPQQLQHVDERKLIQFGLMKNLIRRLQKYPVRVTREEQS----HPARLYTGCHSY 351

The following BLAST results are available for this feature:

BLAST of TCONS_00021349-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NPRL2	1.206e-103	42.29	GATOR complex protein NPRL2 OS=Homo sapiens GN=NPR...	[more]

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TCONS_00021349-protein (polypeptide) - C. hemisphaerica