TCONS_00021341-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021341-protein
Unique Name	TCONS_00021341-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1053

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021341-protein ID=TCONS_00021341-protein|Name=TCONS_00021341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1053bp
MAKVSVDKELFFKRIKKVYDAWKKGLGEDGPSLEVDALVSIVGQDEDVIY
SKSTALQQWLLGYELTDTLMVLCESHIYFLASKKKIEFLKPVQDGQKKME
NIPPITLLLRNKGDNDSENFKTLINSIKGSKEGKKVGVFVKDKFAGDFSQ
AWKKVYEDASFEKTDISPSMAYVMSSKDENEITTIKKAAHVTSVLFDKFF
KQQVVKIVDEEKSVKHSKLADQIEQALDSKKYLGQGMDPDQVEMCYSPII
QSGGKFNLKFSAVSSDEKLNFGVITCSLGVRYKFYCSNIVRTLMVEPTQE
QQDLYNYLLTLLDFILGKLKPGAKLSEVYASAVKQVEKTKPELKENFVKN
IGFATGIEFREGSLLIDQKHNQKIRKGMVFNISLGFTNLKNKSAKENANK
VYALFLGETVAVSDKDTAAIVLTTSKKQMKNIGMFLKDPEEGEDEEDEVK
IDEKFLPEKKQRDISAEIKRKDHQRELAQQINEEARRRLLDKQNDNDSDK
KTVRNTVAYKNNNLIPRDNNVQELTIFVDRKYEAIILPLFGIPTPFHIST
IKNVSTNVEGDSSYLRINFYCPGSSYGRSDGNIFSNPDSTFVKELVYRSS
NIRVPGESHPPAENLNKALRMIKEVQKRYKTRAAEEKEREGVVKQEDLIL
HKGKGNPKLRDLYVRPQLTSRKCVGSLEAHVNGFRYQNIKGDKIDILYKN
VKHAFFQPCDGEMIIVLHFHLKHPIIIGKKKYRDVQMFTEVGELVTDLGG
KGHHNMRDRDDLAAEQAERELRARLKSAFKTFIEKIEGLTHGVIEFDIPF
RELGFSGVPFKSTVLLQPTTHCVVSFTEQPPFIITLDDLELVHFERVQFH
MKNFDMIFVFKEYTRKVSMISAIPMTSLDSVKEWLNSCDIKYTEGIQSLN
WTKIMKTINDNPEDFFENGGWSFLEPNSEDEAEAEDDDDEDDDEFVPESD
EESEDDDEDEEYDSGDDESDXESEDDDEDEEYDSGDDESDIDDSDYEDDF
DSDESSGKGWSELEEEAKRDDREREREIIQPSSKHSKRKREPSPPRKSKK
KKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011952	XLOC_011952	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021341	TCONS_00021341	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013953	FACT_Spt16p
IPR013719	DUF1747
IPR029148	FACT-Spt16_Nlobe
IPR000994	Pept_M24
IPR029149	Creatin/AminoP/Spt16_NTD
IPR033825	SPT16

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 468..495
None	No IPR available	GENE3D	3.90.230.10		coord: 161..436 e-value: 1.5E-36 score: 125.1
IPR013953	FACT complex subunit Spt16p/Cdc68p	SMART	SM01286	SPT16_2	coord: 526..686 e-value: 1.6E-90 score: 316.7
IPR013953	FACT complex subunit Spt16p/Cdc68p	PFAM	PF08644	SPT16	coord: 526..686 e-value: 2.2E-55 score: 186.9
IPR013719	Domain of unknown function DUF1747	SMART	SM01287	Rtt106_2	coord: 805..895 e-value: 6.8E-38 score: 141.9
IPR013719	Domain of unknown function DUF1747	PFAM	PF08512	Rtt106	coord: 807..893 e-value: 7.4E-17 score: 61.5
IPR029148	FACT complex subunit Spt16, N-terminal lobe domain	SMART	SM01285	FACT_Spt16_Nlob_2	coord: 6..170 e-value: 2.1E-75 score: 266.5
IPR029148	FACT complex subunit Spt16, N-terminal lobe domain	PFAM	PF14826	FACT-Spt16_Nlob	coord: 6..168 e-value: 3.0E-50 score: 170.1
IPR000994	Peptidase M24	PFAM	PF00557	Peptidase_M24	coord: 185..412 e-value: 3.3E-27 score: 95.4
IPR000994	Peptidase M24	SUPERFAMILY	55920	Creatinase/aminopeptidase	coord: 177..423
IPR029149	Creatinase/Aminopeptidase P/Spt16, N-terminal	GENE3D	3.40.350.10		coord: 2..160 e-value: 4.3E-53 score: 179.0
IPR033825	FACT complex subunit SPT16	CDD	cd01091	CDC68-like	coord: 182..423 e-value: 1.60869E-94 score: 301.188

Blast

[Close]

BLAST of TCONS_00021341-protein vs. Swiss-Prot (Human)
Match: SP16H (FACT complex subunit SPT16 OS=Homo sapiens GN=SUPT16H PE=1 SV=1)

HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0
Identity = 563/1075 (52.37%), Postives = 790/1075 (73.49%), Query Frame = 0

Query:    4 VSVDKELFFKRIKKVYDAWKKGLGEDGPSLEVDALVSIVGQDEDVIYSKSTALQQWLLGYELTDTLMVLCESHIYFLASKKKIEFLKPVQD--GQKKMENIPPITLLLRNKGDNDSENFKTLINSIKGSKEGKKVGVFVKDKFAGDFSQAWKKVYEDASFEKTDISPSMAYVMSSKDENEITTIKKAAHVTSVLFDKFFKQQVVKIVDEEKSVKHSKLADQIEQALDSKKYLGQGMDPDQVEMCYSPIIQSGGKFNLKFSAVSSDEKLNFGVITCSLGVRYKFYCSNIVRTLMVEPTQEQQDLYNYLLTLLDFILGKLKPGAKLSEVYASAVKQVEKTKPELKENFVKNIGFATGIEFREGSLLIDQKHNQKIRKGMVFNISLGFTNLKNKSAKENANKVYALFLGETVAVSDKDTAAIVLTTSKKQMKNIGMFLKDPEEGEDEEDEVKIDE--------KFLPEKKQRDISAEIKRKDHQRELAQQINEEARRRLLDKQNDNDSDKKTVRNTVAYKNNNLIPRDNNVQELTIFVDRKYEAIILPLFGIPTPFHISTIKNVSTNVEGDSSYLRINFYCPGSSYGRSDGNIFSNPDSTFVKELVYRSSNIRVPGESHPPAENLNKALRMIKEVQKRYKTRAAEEKEREGVVKQEDLILHKGKGNPKLRDLYVRPQLTSRKCVGSLEAHVNGFRYQNIKGDKIDILYKNVKHAFFQPCDGEMIIVLHFHLKHPIIIGKKKYRDVQMFTEVGELVTDLGGKGHHNMRDRDDLAAEQAERELRARLKSAFKTFIEKIEGLTHGVIEFDIPFRELGFSGVPFKSTVLLQPTTHCVVSFTEQPPFIITLDDLELVHFERVQFHMKNFDMIFVFKEYTRKVSMISAIPMTSLDSVKEWLNSCDIKYTEGIQSLNWTKIMKTINDNPEDFFENGGWSFLEPNSEDEAEAEDDDDEDDDEFVPESDEESEDDDEDEEYDSGDDESDXESEDDDEDEEYDSGDDESDIDDSDY-EDDFDSDESSGKGWSELEEEAKRDD----------------REREREIIQPSSKHSKRKREPSPPRKSKKK 1051
            V++DK+ +++R+K++Y  W+KG  E      VDA+V  VG DE+++Y+KSTALQ WL GYELTDT+MV C+  I F+ASKKK+EFLK + +  G +     P ITLL+R K +++  +F  +I +IK SK GKK+GVF KDKF G+F ++W        F+K DIS  +AY ++ K++ E+  +KKAA +TS +F+KFFK++V++IVD ++ V+HSKLA+ +E+A++ KKYL  G DP  VEMCY PIIQSGG +NLKFS VS    ++FG ITC++G+R+K YCSN+VRTLMV+P+QE Q+ YN+LL L + +L +L+ G K+ +VY + +  V+K KPEL     KN+GF  GIEFREGSL+I+ K+  K++KGMVF+I+LGF++L NK  K+   K YALF+G+TV V D+D  A VLT+ KK++KN+G+FLK+ +E E+EE++ + ++          L E+ + +++AE KR+ HQ+ELA Q+NEEA+RRL +++ +    +K  ++ V+YKN +L+P++ +++E+ I++D+KYE +I+P+FGI TPFHI+TIKN+S +VEGD +YLRINFYCPGS+ GR++GNIF NP++TFVKE+ YR+SNI+ PGE   PA NL  A R+IKEVQKRYKTR AEEKE+EG+VKQ+ L+++  + NPKL+DLY+RP +  ++  GSLEAHVNGFR+ +++GDK+DILY N+KHA FQPCDGEMIIVLHFHLK+ I+ GKK++ DVQ +TEVGE+ TDLG   H +M DRDDL AEQ ERE+R +LK+AFK FIEK+E LT   +EF++PFR+LGF+G P++ST LLQPT+  +V+ TE PPF++TLD++EL+HFERVQFH+KNFDM+ V+K+Y++KV+MI+AIP+ SLD +KEWLNSCD+KYTEG+QSLNWTKIMKTI D+PE FFE GGWSFLEP      E E  D E+ D         SE + EDE ++  +D+ + E ED DED   ++       ++SDY ++   S+E SGK W ELEEEA++ D                R+R+  +       ++  R  S P K K+K
Sbjct:    3 VTLDKDAYYRRVKRLYSNWRKGEDEYA---NVDAIVVSVGVDEEIVYAKSTALQTWLFGYELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFDKMIEAIKESKNGKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAVKEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAIEEKKYLA-GADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGAITCAMGIRFKSYCSNLVRTLMVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGFGMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLV-DEDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTAEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQI-QKARKSNVSYKNPSLMPKEPHIREMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNIFPNPEATFVKEITYRASNIKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGK--HQHMHDRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEP------EGEGSDAEEGD---------SESEIEDETFNPSEDDYEEEEEDSDEDYSSEA-------EESDYSKESLGSEEESGKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKKRK 1047

The following BLAST results are available for this feature:

BLAST of TCONS_00021341-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021341-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SP16H	0.000e+0	52.37	FACT complex subunit SPT16 OS=Homo sapiens GN=SUPT...	[more]

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TCONS_00021341-protein (polypeptide) - C. hemisphaerica