TCONS_00021301-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021301-protein
Unique NameTCONS_00021301-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length497

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021301-protein ID=TCONS_00021301-protein|Name=TCONS_00021301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MPVPAEVAESSSDQCESTSRMKTRKKQATISSLFQKSSKRKKVNKTEDAE
QEKKKLKLEDDCAAGSSSGSSAGPSSLGNSSKQIEETSTKSASNASCKAE
EKDSNKMETTINKKGVERCKECRQVIDKDEIKMYEGDPEDAVEEFLMLCD
PRLSLLSGDEQQFESYDERPQHKLTEFSVYDKCGHLAAFDTGLIEKNVEL
FFSGYVKPIYDETVDKEGGVCTKKMGPINEWWIAGFDGGENALIGFGTAF
AEYVLVRPSEDYAPFMNAVSEKICMSKILIELILSDPDATYEELLNKLET
TVPPENCSKLTEDSLLRHAQFLVEQVESYDSAAPEGDDEPPLIASMCVRD
LIKLAGVTLGKRRALRGIKVKEKKKALGPTFATTTPLVRYVFDTFFQDQL
DVKGSAQRKRRCGVCDVCQQPDCGNCRACKDMVKFGGTGRAKQCCINRRC
PNMAVQEAEESCADSQDEDAQPDLKSPLKDQQSPKPARKGKSNSSKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011927XLOC_011927Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021301TCONS_00021301Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002857Znf_CXXC
IPR022702Cytosine_MeTrfase1_RFD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..497
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 406..450
e-value: 1.7E-12
score: 47.1
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 405..451
score: 13.688
IPR022702DNA (cytosine-5)-methyltransferase 1, replication foci domainPFAMPF12047DNMT1-RFDcoord: 167..300
e-value: 1.6E-38
score: 131.9

Blast
[Close]
BLAST of TCONS_00021301-protein vs. Swiss-Prot (Human)
Match: DNMT1 (DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1 SV=2)

HSP 1 Score: 416.387 bits (1069), Expect = 2.109e-131
Identity = 211/368 (57.34%), Postives = 267/368 (72.55%), Query Frame = 0 
Query:  101 EKDSNKMETTINKK-GVERCKECRQVIDKDEIKMYEGDPEDAVEEFLMLCDPRLSLLSGDEQQFESYDERPQHKLTEFSVYDKCGHLAAFDTGLIEKNVELFFSGYVKPIYDETVDKEGGVCTKKMGPINEWWIAGFDGGENALIGFGTAFAEYVLVRPSEDYAPFMNAVSEKICMSKILIELILSDPDATYEELLNKLETTVPPE--NCSKLTEDSLLRHAQFLVEQVESYDSAAPEGD-DEPPLIASMCVRDLIKLAGVTLGKRRA---LRGIKVKEKKKALGPTFATTTPLVRYVFDTFFQDQLDV-----KGSAQRKRRCGVCDVCQQPDCGNCRACKDMVKFGGTGRAKQCCINRRCPNMAVQ 456
            EK   + +T +N K    +C +C Q +D  ++K Y   P DAV+E  ML + +LS+   +E  FESY+  PQHKLT FSVY K GHL   DTGLIEKN+ELFFSG  KPIYD+    EGGV  K +GPINEWWI GFDGGE ALIGF T+FAEY+L+ PS +YAP    + EKI +SKI++E + S+ D+TYE+L+NK+ETTVPP   N ++ TEDSLLRHAQF+VEQVESYD A   GD DE P+  + C+RDLIKLAGVTLG+RRA    + I+   ++K  GPT ATTT LV  +FDTFF +Q++      K +A ++RRCGVC+VCQQP+CG C+ACKDMVKFGG+GR+KQ C  RRCPNMA++
Sbjct:  334 EKKMARAKTVMNSKTHPPKCIQCGQYLDDPDLK-YGQHPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEA---GDSDEQPIFLTPCMRDLIKLAGVTLGQRRAQARRQTIRHSTREKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMK 697
The following BLAST results are available for this feature:
BLAST of TCONS_00021301-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNMT12.109e-13157.34DNA (cytosine-5)-methyltransferase 1 OS=Homo sapie... [more]
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