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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00021297-protein ID=TCONS_00021297-protein|Name=TCONS_00021297-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1525bp
RISELCLAQSNIHNNIDPLVKEMDSTNFLANLTERMGDKQPEKFTVKRTS
KIDQIQQNDKKLKTGKQTTIGMSVIKWIATVIMFLLTTASLVTSKVTVIS
IGQFMRPANFSGEDKTCDAGGCNSDIAFVMMIYILLVPNIISFVRTFFKA
AFSASEPLPTCKSVIYGITGSTFEIIGLSSFAFILIATSQNFGRTVLYMN
GIFIFPILLGFLMECRKLSKKPTTDDGAVYAPYESEKQRVKEKAAKRRHL
CQSILYFIAGIFAAGGFGYIMYLTESMTDRITIPLFMLCISLAWSPTIFK
RQTNPQQVTEEEEMNAAPVDNIRVKSSRIKMTLICSLYKIFLIFLISFGL
AALFHITDDTNPFTAFKRGHSYLSINSTLYTLFALQIASSFIGYVMCGLA
CTMNLQKVCFVFPLLLATPLSLAVSVNQVCDWLTLEPCHNYKGDDYETLG
LGLLLWLSQIFSYSFQFWKSQQFLMAGEELLFWLPTYNGCLLEQHMLLNR
KNEVVDEHFVNYHEIVRNSCIYICTTMYHEADYEMEQLLESLSKVDMARK
ECGRQFEAHIFFDDGARGDVVKLYALQLLSLVKDTMGIEPAKAFKLETPY
GMQLKWALPNGMPFVLHLKDKMKVKSKKRWSQVMYMSYVLDFKQDKSKDD
LTYILATDADVRFAPTDVMALMDLMSRNPRVGAVCGRTHPMGSGPMVWYQ
IFDYAIGHWLLKVANHVMGSVLCSPGCFSVYRARAIRDVLPQYATGVDCA
MDFLIKDMGEDRWFCTLLVESGWKLEYCATSEDSTYCPEEFDEFFKQRRR
WGPSTFANSVIVLQRHAEIRKNNDAISMPFIIYQVVLLISSIIGPATVLL
VIAGGLSYAYEESISLVGALIAMVIMTTVFTIVCLFCSQNTQLKWAKFLT
FVFAIIMAIVFVGMILQTVEDVGRYIDPPTVKPPTTETPGWHNGTVTTTK
APVVYDTYKWMFTPPTWYLFILLGIFFMTAMLHGFEGLSIIHGFWYLLCL
PSGYLLLTIYSVANLTDRSWGTREGKTASAVETADMTWYEKLAGYFKYFC
WCCVPPNLREKAPAAQQETRVVTEEGEGNGGEETDDDTSSEDLDETDGTE
KLLVDIEEDGEEVDDANKPLLKKEKLKPKKSAMKKAGSLKRFPSIEMLDE
KEKRLRSSSGSNSSFRFPGDHGHVRFSKSLPKLNAATTVDEWLPAEFKNY
APNFKQQGYDTVAFIAGNIKEKDLRDLGIENRGHRKRLMFFIDSLPPEDM
FSDVPESVEEWLINLALEEYWPKFYESSYTEPRDLADIKYMTSENITTIF
GISKEGHLKRIKAATSVLQYPTKSQTKIREARKAVMAEPVRQLKTDNADG
GEEYEFWNELREICLLPEQAAFNQSGDLVNKLGDLRDTCLMVLTVANVLW
LAFMITVMSQGDKLNVLGSDFAAVAFLFIYGFVLLMQFLSLLWHRMETLI
HYIARAPFKRGHLKSNWAWRDDDLPPAPEPELLDEIRRRRNKSQIRSRLS
SNSSQTTDHHEPLLGGSSNRGVSFS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 1181..1248
e-value: 8.5E-8
score: 41.9
coord: 1250..1321
e-value: 17.0
score: 6.3 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF00536 | SAM_1 | coord: 1187..1245
e-value: 2.4E-8
score: 34.2 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 1184..1248
score: 9.816 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 1256..1321
score: 10.022 |
| IPR029044 | Nucleotide-diphospho-sugar transferases | GENE3D | 3.90.550.10 | | coord: 520..829
e-value: 3.2E-24
score: 85.1 |
| IPR029044 | Nucleotide-diphospho-sugar transferases | SUPERFAMILY | 53448 | Nucleotide-diphospho-sugar transferases | coord: 623..809
coord: 521..581 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 1187..1246
e-value: 1.2E-10
score: 41.3 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 1252..1324
e-value: 5.6E-9
score: 35.6 |
| None | No IPR available | PFAM | PF03142 | Chitin_synth_2 | coord: 650..899
e-value: 1.3E-23
score: 83.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1063..1136 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1480..1525 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 1255..1319 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 1179..1246 |
Blast
The following BLAST results are available for this feature:
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